Module 1 Portfolio Check

Module 1

Evidence Worksheet_01 for “Prokaryotes: The Unseen Majority”

Learning Objectives

Describe the numerical abundance of microbial life in relation to ecology and biogeochemistry of Earth systems.

General Questions

What were the main questions being asked?

This article asks and attempts to answer the following questions:

  1. What is the total number of prokaryotic cells in the 3 main habitats and the cumulative total on the planet?

  2. What is the total amount of carbon contained in prokaryotic cells in the 3 main habitats and the global total?

  3. What is the average turnover rate and productivity of prokaryotes in the 3 main habitats and the global total?

What were the primary methodological approaches used?

Cell density data from samples ofthe 3 main representative habitats (Aquatic, soil and subsurface environments) were analyzed and total number estimations were generated. Aquatic numbers were estimated from mean sample values of several primary studies. Soil numbers were estimated based on cultivated soil sample numbers.Subsurface numbers were extrapolated from various studies’ sample data, but also estimated from calculating average porosity of terrestrial subsurface environments and average subsurface prokaryotic volume, and also from groundwater sample data. Carbon content was estimated in soil and subsurface environments as half the dry weight of the average prokaryotic cell. In aquatic environments, the upper estimate of carbon per cell is used.

Summarize the main results or findings.

The total number of prokaryotes on Earth is estimated to be 4-6x10^30 cells and the total amount of prokarotic carbon is esitmated to be 350-550 Pg, which is 60-100% of the total carbon in plants. Prokaryotes also cumulativey contain 10 times the amount of phosphorous and nitrogen than plants. Heterotropic prokaryote turnover is fastest in the upper 200m of the ocean and slowest in subsurface environments. The estimated global cellular production rate is 1.7x10^30 cells/yr. This also leads to a large capacity for genetic diversification through mutation.

Do new questions arise from the results?

  1. How can subsurface estimation methods be refined to more accurately characterize the subsurface prokaryotic world?

  2. How can phylogenetic analysis methods be changed to account for the high degree of diversity and mutation rate in prokaryotes?

  3. With the differences in prokaryotic genomes and evolution through mutation, how do we definte a prokaryotic species?

Were there any specific challenges or advantages in understanding the paper (e.g. did the authors provide sufficient background information to understand experimental logic, were methods explained adequately, were any specific assumptions made, were conclusions justified based on the evidence, were the figures or tables useful and easy to understand)?

Overall, the paper did a decent job of combining sample data from multiple papers and generating population estimates of the 3 major habitats and representing this data in easy-to-read tables. However, much of this data is based on estimation, with the extrapolation of subsurface numbers having a high degree of error. Some assumptions made include the use of an average prokaryotic cell volume and an average carbon content per cell value, on which global total estimates are made. Despite this, the evidence is adequate given our current models and techniques and thus the conclusions are valid. The paper rightfully acknowledges the limitations of some methods and discrepancies between studies. With the development of sampling methods and improved metagenomic analytical techniques, more accurate estimations can be made in the future.

Evidence Worksheet_02 “Life and the Evolution of Earth’s Atmosphere”

Learning objectives:

Comment on the emergence of microbial life and the evolution of Earth systems

Indicate the key events in the evolution of Earth systems at each approximate moment in the time series. If times need to be adjusted or added to the timeline to fully account for the development of Earth systems, please do so.

+ 4.6 billion years ago - Formation of the Solar System from a local accretion disk, creating the Sun and the planets.

+ 4.2 billion years ago - Formation of the oceans, creating the land-sea surface we know today. There is some evidence that plate tectonics started at this time, as well as the first amino acids and RNA.

+ 3.8 billion years ago - Earliest evidence of life in the form of cells.

+ 3.75 billion years ago - A group splits off from the last common ancestor and forms the domain, Archaea.

+ 3.5 billion years ago - Evolution of the domain, Prokaryotes and evolution of photosynthesis. There is fossil evidence for the formation of microbial aggregations and biofilms. 

+ 3.0 billion years ago - First evidence for the presence of viruses

+ 2.7 billion years ago - Evolution of cyanobacteria

+ 2.2 billion years ago - The Great Oxygenation Event, brought upon by massed photosynthesis by cyanobacteria. 

+ 2.1 billion years ago - Evolution of Eukarya and later (2.0 Gya), evidence of endosymbiosis by Eukarya to form chloroplasts and mitochondria

+ 1.3 billion years ago - Lineages that eventually formed plant, animal and fungal kingdoms split off from the main eukaryote ancestral line

+ 550,000 years ago - First land plants evolved

+ 200,000 years ago - Evolution of mammals

Describe the dominant physical and chemical characteristics of Earth systems at the following waypoints:

+ Hadean - The early Hadean might have been characterized by global glaciation due to a weak, young Sun. Later, a very hot atmosphere comprised mainly of water vapour and CO2 formed, with a silica crust on the surface

+ Archean - About 3 times hotter than the current Earth, with a liquid water acidic ocean and a mostly CO2 atmosphere

+ Precambrian - The evolution of photosynthesis and the massed expansion of cyanobacteria caused a huge increase in atmospheric oxygen, called the Great Oxygenation Event

+ Proterozoic  - Oxygen rich, hot atmosphere

+ Phanerozoic  - Exolution of land plants contributes to a further increase in atmospheric oxygen levels. The Earth is also slightly cooler. 

Evidence Worksheet_03 “The Anthropocene”

Learning Objectives

Evaluate human impacts on the ecology and biogeochemistry of Earth systems.

General Questions

What were the main questions being asked?

  1. When did the Anthropocene begin?

  2. Have humans created imbalances in modern biogeochmical cycles (particularly the N and C cycles), and how would this affect the cycles of the future?

  3. How will the engineered Anthropocene affect global biodiversity and the climate?

What were the primary methodological approaches used?

Summarize the main results or findings.

Do new questions arise from the results?

Were there any specific challenges or advantages in understanding the paper (e.g. did the authors provide sufficient background information to understand experimental logic, were methods explained adequately, were any specific assumptions made, were conclusions justified based on the evidence, were the figures or tables useful and easy to understand)?

Problem set_01

Problem set_02 ??Microbial Engines??

Learning objectives:

Discuss the role of microbial diversity and formation of coupled metabolism in driving global biogeochemical cycles.

Specific Questions:

  • What are the primary geophysical and biogeochemical processes that create and sustain conditions for life on Earth? How do abiotic versus biotic processes vary with respect to matter and energy transformation and how are they interconnected?

  • Why is Earth’s redox state considered an emergent property?

  • How do reversible electron transfer reactions give rise to element and nutrient cycles at different ecological scales? What strategies do microbes use to overcome thermodynamic barriers to reversible electron flow?

  • Using information provided in the text, describe how the nitrogen cycle partitions between different redox “niches” and microbial groups. Is there a relationship between the nitrogen cycle and climate change?

  • What is the relationship between microbial diversity and metabolic diversity and how does this relate to the discovery of new protein families from microbial community genomes?

  • On what basis do the authors consider microbes the guardians of metabolism?

Data Science Friday 1 - Installation

Installation Screenshots

Git Bash

Git Bash

RStudio

RStudio

GitHub

GitHub

Data Science Friday 2 - Introduction to Git

Instructions for portfolio repo creation, initialization and pushing to GitHub

Configure Git command line to GitHub online account

command: git config –global user.name “Your Name”

command: git config –global user.email “youremail@email.com

Locate to “Documents” folder and confirm location

command: cd ~/Documents

command: pwd

Clone GitHub web MICB425 repository to “Documents”

command: git clone https://github.com/EDUCE-UBC/MICB425 MICB425_materials

Check MICB425_materials status and pulling

command: git status

command: git fetch

command: git pull

Create master repository in “Documents” and create empty .txt file

command: mkdir MICB425_portfolio

command: touch ID.txt

Initiate and push local repository (after creating online repo on GitHub)

command: git init

command: git add.

command: git commit -m “First commit”

command: git remote add origin https://remote_repository_URL

command: git remote -v

command: git push -u origin master

Data Science Friday 3 - Pretty_html Challenge

Pretty_html

Zhong Zack Dang (22481148)

R Markdown PDF Challenge

The following assignment is an exercise for the reproduction of this .html document using the RStudio and Rmarkdown tools we’ve shown you in
class. Hopefully by the end of this, you won’t feel at all the way this poor PhD student does. We’re here to help, and when it comes to R, the
internet is a really valuable resource. This open-source program has all kinds of tutorials online.

http://phdcomics.com/ Comic posted 1-17-2018

Challenge Goals

The goal of this R Markdown html challenge is to give you an opportunity to play with a bunch of different RMarkdown formatting. Consider it a
chance to flex your RMarkdown muscles. Your goal is to write your own RMarkdown that rebuilds this html document as close to the original as
possible. So, yes, this means you get to copy my irreverant tone exactly in your own Markdowns. It’s a little window into my psyche. Enjoy =)

hint: go to the PhD Comics website to see if you can find the image above
If you can’t find that exact image, just find a comparable image from the PhD Comics website and include it in your markdown

Here’s a header!

Let’s be honest, this header is a little arbitrary. But show me that you can reproduce headers with different levels please. This is a level 3 header, for your reference (you can most easily tell this from the table of contents).

Another header, now with maths

Perhaps you’re already confused by the whole markdown thing. Maybe you’re so confused you’ve forgotten how to add. Never fear! A
calculator
R is here:

1231521+12341556
## [1] 13573077

Table Time

Or maybe, after you’ve added those numbers, you feel like it’s about time for a table!
I’m going to leave all the guts of the coding here so you can see how libraries (R packages) are loaded into R (more on that later). It’s not terribly
pretty, but it hints at how R works and how you will use it in the future. The summary function used below is a nice data exploration function that
you may use in the future.

library(knitr)
kable(summary(cars), caption = "I made this table with kable in the knitr package library")
I made this table with kable in the knitr package library
speed dist
Min. : 4.0 Min. : 2.00
1st Qu.:12.0 1st Qu.: 26.00
Median :15.0 Median : 36.00
Mean :15.4 Mean : 42.98
3rd Qu.:19.0 3rd Qu.: 56.00
Max. :25.0 Max. :120.00

And now you’ve almost finished your first RMarkdown! Feeling excited? We are! In fact, we’re so excited that maybe we need a big finale eh?
Here’s ours! Include a fun gif of your choice!

Data Science Friday 4 - Working with Data

Exercise 1 - Importing data under correct parameters

library(tidyverse)
## -- Attaching packages --------------------------------------------------------------------- tidyverse 1.2.1 --
## v ggplot2 2.2.1     v purrr   0.2.4
## v tibble  1.4.2     v dplyr   0.7.4
## v tidyr   0.8.0     v stringr 1.2.0
## v readr   1.1.1     v forcats 0.2.0
## -- Conflicts ------------------------------------------------------------------------ tidyverse_conflicts() --
## x dplyr::filter() masks stats::filter()
## x dplyr::lag()    masks stats::lag()
read.table(file="Saanich.OTU.txt", header=TRUE, row.names=1, sep="\t", na.strings=c("NAN", "NA", "."))
##             Otu0001 Otu0002 Otu0003 Otu0004 Otu0005 Otu0006 Otu0007
## Saanich_010     462       0    5317      41     169       2   22219
## Saanich_100   11444       0   32026    1367    4884      12    3531
## Saanich_120   40906       0   13932    5606    8947      86    1613
## Saanich_135   52809       4    3764    7235   11042     264    1081
## Saanich_150   83079      12     860   10392    9431     159     303
## Saanich_165   95560       9     342   20491    6933     217     250
## Saanich_200   15262   77958      92     530     141   33892     146
##             Otu0008 Otu0009 Otu0010 Otu0011 Otu0012 Otu0013 Otu0014
## Saanich_010   24197      61     534     359      60      81       0
## Saanich_100    1344    1669    8705    6122    1631    2321       4
## Saanich_120     751    3594    5544    5569    3381    3622     115
## Saanich_135     949    2662    2009    3234    2146    4115     163
## Saanich_150     400    4313     722    1764    1711    3511     240
## Saanich_165      58   11878     296     696    6080     454   11882
## Saanich_200      66     119      29       0     636      14       3
##             Otu0015 Otu0016 Otu0017 Otu0018 Otu0019 Otu0020 Otu0021
## Saanich_010      59     172     180     210    7106    6481       0
## Saanich_100    2030    3823    3288    4481     901    1262       0
## Saanich_120    3087    3590    3467    2625     574     626     117
## Saanich_135    3664    1975    1769     952     505     497    1310
## Saanich_150    3058     983     994     427     185     104    4138
## Saanich_165     356     423     361     813      41      79    2124
## Saanich_200       0       2       0      66      26      29    1202
##             Otu0022 Otu0023 Otu0024 Otu0025 Otu0026 Otu0027 Otu0028
## Saanich_010    1238       2    7468       0    6658    6802    5064
## Saanich_100    3430     195     107       0     394     206     946
## Saanich_120    2057     633      72       2     235     146     497
## Saanich_135    1372     549     102      13     208     246     326
## Saanich_150     688     752      46      17      47      53     151
## Saanich_165      69    6096      16      36      20       9      43
## Saanich_200      11      18       6    7684      15       4      12
##             Otu0029 Otu0030 Otu0031 Otu0032 Otu0033 Otu0034 Otu0035
## Saanich_010      83     169       3    2669     661       1      55
## Saanich_100    2312    2724     105    1404    3157     168    1993
## Saanich_120    2477    2104     663    1031    1720     720    2100
## Saanich_135    1002    1038     692     610     564     943    1027
## Saanich_150     507     396     731     422     112    1653     478
## Saanich_165     567     112    3482     364      61    2585     241
## Saanich_200      74       0     845       9       4     190       0
##             Otu0036 Otu0037 Otu0038 Otu0039 Otu0040 Otu0041 Otu0042
## Saanich_010       0    2699    4012    1687      91     150     468
## Saanich_100       0    2284     530    1728    2340    2944    1908
## Saanich_120       0     505     280     686    1279    1349    1247
## Saanich_135       2     152     326     493     758     225     531
## Saanich_150       0      13     112     190     261      48     217
## Saanich_165       0      22      29     223      71      61     143
## Saanich_200    5879       4       0      10      12       0       9
##             Otu0043 Otu0044 Otu0045 Otu0046 Otu0047 Otu0048 Otu0049
## Saanich_010     216       0      17       0    3707       0      78
## Saanich_100    1802       4     808       0      57       6    1630
## Saanich_120    1205       2    1111       0      45      34    1229
## Saanich_135    1009      11     782       6      79     102     618
## Saanich_150     245       2     884       0      26     200     208
## Saanich_165      21      29     735       0       0    3528      75
## Saanich_200       0    4445      42    4135       0      32       0
##             Otu0050 Otu0051 Otu0052 Otu0053 Otu0054 Otu0055 Otu0056
## Saanich_010     173       0    2042      83     111       0    2737
## Saanich_100    2335       2     637    1818    1939      12     265
## Saanich_120     996       8     380    1122     995      14     148
## Saanich_135     233       3     366     302     267      37     144
## Saanich_150      27       6     135     171      68      23      41
## Saanich_165      12      34      12      23      17      17       5
## Saanich_200       0    3588       0       4       0    3283       6
##             Otu0057 Otu0058 Otu0059 Otu0060 Otu0061 Otu0062 Otu0063
## Saanich_010     593       0       0     123      93     226     872
## Saanich_100    1190       0       0    1313    1651     541    1088
## Saanich_120     697       0       0     905     825    1126     581
## Saanich_135     544       0       0     644     252     600     138
## Saanich_150     211       0       0     165      73     386      53
## Saanich_165      31       6      20      20      18      12      10
## Saanich_200       2    3219    3165       0       0       0       4
##             Otu0064 Otu0065 Otu0066 Otu0067 Otu0068 Otu0069 Otu0070
## Saanich_010    2485    2128       0    2182       7    1033       6
## Saanich_100      59     118      64      54     379     582     185
## Saanich_120      32      56     370      22     690     318     436
## Saanich_135      56      63     583      50     344     168     358
## Saanich_150      20      10    1105       7     231      44     204
## Saanich_165       5      17     228       4     619      40     832
## Saanich_200       0       0       2       0       6       0     116
##             Otu0071 Otu0072 Otu0073 Otu0074 Otu0075 Otu0076 Otu0077
## Saanich_010       0      63       0       1     721     734       0
## Saanich_100       0    1277       0     238     535     600      50
## Saanich_120       0     566       0     268     255     290     196
## Saanich_135       0     115       2     159     175     144     139
## Saanich_150       0      13       0     189      64      43     296
## Saanich_165      16      21       0     792      84      21    1048
## Saanich_200    2064       0    2028     211       5       7       4
##             Otu0078 Otu0079 Otu0080 Otu0081 Otu0082 Otu0083 Otu0084
## Saanich_010     181      82     121       0    1271      16     344
## Saanich_100     824     918     654       0      93     606     593
## Saanich_120     430     492     465       0      69     432     286
## Saanich_135     192     145     269       0      25     271     166
## Saanich_150      56      36      67       0      15     106      20
## Saanich_165       9       5      12       2       4       6      12
## Saanich_200       4       2       0    1580       6       2       2
##             Otu0085 Otu0086 Otu0087 Otu0088 Otu0089 Otu0090 Otu0091
## Saanich_010     120       0       0    1053      13      11     781
## Saanich_100       6       2       0     116     785     441     320
## Saanich_120       2      27       0      73     394     345      95
## Saanich_135       2      45       0      75     120     107      37
## Saanich_150    1268      72       0      32      15      52      13
## Saanich_165       0    1216       0       2       6     309       6
## Saanich_200       2      14    1373       3       2      18       5
##             Otu0092 Otu0093 Otu0094 Otu0095 Otu0096 Otu0097 Otu0098
## Saanich_010     163      12      24       4     367       6      19
## Saanich_100     571     385     600     704     369     368     327
## Saanich_120     390     378     293     335     203     306     235
## Saanich_135      98     104     200      79     135     210      73
## Saanich_150      23      83      33       1      38      95      40
## Saanich_165       8     281       0       6       2      46     361
## Saanich_200       0       0       0       0       0      31       0
##             Otu0099 Otu0100 Otu0101 Otu0102 Otu0103 Otu0104 Otu0105
## Saanich_010     809      63     214       2      11       7       0
## Saanich_100      82     509     318     295     529     478       0
## Saanich_120      57     262     160     246     245     288       0
## Saanich_135      45      95     222     110      83      64       0
## Saanich_150      13      39      65      66      33      31       0
## Saanich_165       8      26       2     246      64      65       0
## Saanich_200       6       2       0       8       0       9     930
##             Otu0106 Otu0107 Otu0108 Otu0109 Otu0110 Otu0111 Otu0112
## Saanich_010     581     887       0       0     675     831     742
## Saanich_100     182       8      26       0      95       6      34
## Saanich_120      95       5     105       0      45       4      15
## Saanich_135      48      16     182       0      24       9       0
## Saanich_150      10       0     225       0      23       4       2
## Saanich_165      12       4     292       2      10       0       2
## Saanich_200       0       2      91     879       8       0       0
##             Otu0113 Otu0114 Otu0115 Otu0116 Otu0117 Otu0118 Otu0119
## Saanich_010     723     701      10     741      45      14      95
## Saanich_100      28      21     530       2     436     288     260
## Saanich_120       8      28     204       0     163     250     263
## Saanich_135      15      30      23       8      75     131      91
## Saanich_150       7       3       2       7      13      55      21
## Saanich_165       2       0       0       2       6       0       8
## Saanich_200       5       0       0       0       2       0       0
##             Otu0120 Otu0121 Otu0122 Otu0123 Otu0124 Otu0125 Otu0126
## Saanich_010       0       0     266       0       0      12     487
## Saanich_100       0      22     308     153     226     268      97
## Saanich_120       0      92      86     338     305     274      55
## Saanich_135       0      79      54     155     139     112      34
## Saanich_150       0      84       6      59      41      32       4
## Saanich_165       0     448       0       7       0       2       3
## Saanich_200     736       7       2       0       0       6       0
##             Otu0127 Otu0128 Otu0129 Otu0130 Otu0131 Otu0132 Otu0133
## Saanich_010     656     637     392      84       2       5       0
## Saanich_100      12       9     221     210     242     326       0
## Saanich_120       2      12      40     245     269     229       0
## Saanich_135       9      11       8      84      95      61       0
## Saanich_150       0       7       0      18      33      14       8
## Saanich_165       0       2       0       7       6       8       0
## Saanich_200       0       0       2       0       0       0     634
##             Otu0134 Otu0135 Otu0136 Otu0137 Otu0138 Otu0139 Otu0140
## Saanich_010     621       0     290       4       0     527      92
## Saanich_100       0       0     150     180      41       3     246
## Saanich_120       0       0      89     225      92       9     109
## Saanich_135       0       0      53      95      87      10      85
## Saanich_150       0       0      18      42     157       0       7
## Saanich_165       0       0       0      25     146       0       4
## Saanich_200       0     605       0      22      58       0       0
##             Otu0141 Otu0142 Otu0143 Otu0144 Otu0145 Otu0146 Otu0147
## Saanich_010     379       0       8       2       6      13      25
## Saanich_100      90      18     295     203     151     259     286
## Saanich_120      39     100     145     209     246     149     120
## Saanich_135      24     161      45      67      75      45      36
## Saanich_150       6     248      14      22       8      17       2
## Saanich_165       0       4      23       0       3       0       2
## Saanich_200       0       0       0       0       0       0       0
##             Otu0148 Otu0149 Otu0150 Otu0151 Otu0152 Otu0153 Otu0154
## Saanich_010       2     442     423       0     425       4     311
## Saanich_100     209       2      15      11       4     155      66
## Saanich_120     143       0       2      51       2     186      24
## Saanich_135      40       6       5     108       3      51      23
## Saanich_150      44       0       2     106       2      26       8
## Saanich_165      15       0       0      85       0      14       2
## Saanich_200       2       0       0      85       0       0       0
##             Otu0155 Otu0156 Otu0157 Otu0158 Otu0159 Otu0160 Otu0161
## Saanich_010     423       5       4     327     310     338       4
## Saanich_100       0     207     102      37      58      36     160
## Saanich_120       0     170     167      13      25      20     157
## Saanich_135       0      37     100      15      16      11      44
## Saanich_150       2       4      47      19       2       4      28
## Saanich_165       0       0       0       0       0       2      15
## Saanich_200       0       0       0       0       0       0       0
##             Otu0162 Otu0163 Otu0164 Otu0165 Otu0166 Otu0167 Otu0168
## Saanich_010       0       0     147       0       0       5       0
## Saanich_100       0      10      27      44       8     234       0
## Saanich_120      20      72      75      94      57     117      10
## Saanich_135      51     118      71     116      63      38       6
## Saanich_150     124     180      81     143     124       2      36
## Saanich_165     207      22       0       4     139       0     277
## Saanich_200       2       0       0       0       7       0      65
##             Otu0169 Otu0170 Otu0171 Otu0172 Otu0173 Otu0174 Otu0175
## Saanich_010       2       0      65       8       2      37      44
## Saanich_100     135       4       0     208     120     182     217
## Saanich_120     148       0       0     125     158      99      77
## Saanich_135      66       2       0      29      47      29      23
## Saanich_150      20       0     312       4      13      18       4
## Saanich_165       6       0       0       0      26       0       0
## Saanich_200      12     375       0       0       4       0       0
##             Otu0176 Otu0177 Otu0178 Otu0179 Otu0180 Otu0181 Otu0182
## Saanich_010     211       2       5       0     334       0     342
## Saanich_100      88     128     225      20      16     235       2
## Saanich_120      30     134     120      31       2     105       4
## Saanich_135      17      64       8     101       4      15       8
## Saanich_150      15      20       2     134       0       2       0
## Saanich_165       0      10       0      57       0       0       0
## Saanich_200       0       2       0      15       2       0       0
##             Otu0183 Otu0184 Otu0185 Otu0186 Otu0187 Otu0188 Otu0189
## Saanich_010       0       3       0     328       6       3     314
## Saanich_100       0     174     103       0     185     109       2
## Saanich_120       0     141     160       0      75      71       0
## Saanich_135       0      18      35       4      16      20       0
## Saanich_150       0       5      20       0      26      28       2
## Saanich_165       0       2      15       0      20      90       0
## Saanich_200     347       0       0       0       0       3       0
##             Otu0190 Otu0191 Otu0192 Otu0193 Otu0194 Otu0195 Otu0196
## Saanich_010     291       0      57       0     258       0       6
## Saanich_100       7     160     173     141      38       0     148
## Saanich_120       3     120      50     138       3       0      82
## Saanich_135      10      36      34      25       6       0      38
## Saanich_150       0       0       2       6       4       0      20
## Saanich_165       2       0       0       0       0       0       6
## Saanich_200       5       0       0       0       0     300       0
##             Otu0197 Otu0198 Otu0199 Otu0200 Otu0201 Otu0202 Otu0203
## Saanich_010       0       0     208       0       2       0     280
## Saanich_100       4       0      49       0      95      54       0
## Saanich_120      20       0      14       0     132      95       0
## Saanich_135      41       0      11       0      29      49       0
## Saanich_150     102       0       3       0      15      20       0
## Saanich_165      83       0       4       0       2      61       0
## Saanich_200      47     292       0     287      11       3       0
##             Otu0204 Otu0205 Otu0206 Otu0207 Otu0208 Otu0209 Otu0210
## Saanich_010     273      25     254       0       2     167       0
## Saanich_100       4     151       6       0     178      41      11
## Saanich_120       2      85       0       0      75      24      97
## Saanich_135       0      15       7       0      10      28      78
## Saanich_150       0       3       0       0       0       4      76
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       0       0     266       0       0       0
##             Otu0211 Otu0212 Otu0213 Otu0214 Otu0215 Otu0216 Otu0217
## Saanich_010       4     258       0       1       0       0       0
## Saanich_100      75       0      12     139       0      88       0
## Saanich_120     128       0      46      97       0      98      15
## Saanich_135      35       2      52      14       0      38      25
## Saanich_150      14       0      71       5       0      21      95
## Saanich_165       6       0      77       0       0       8     112
## Saanich_200       0       0       2       0     254       0       2
##             Otu0218 Otu0219 Otu0220 Otu0221 Otu0222 Otu0223 Otu0224
## Saanich_010     230       4      55       2     228       0       2
## Saanich_100      13     102     100      57       2       0     118
## Saanich_120       2     126      48     126       5       0      65
## Saanich_135       4      16      34      45       0       0      35
## Saanich_150       0       0       0      11       0       0      13
## Saanich_165       0       0       4       0       0       0       0
## Saanich_200       0       0       0       0       0     234       0
##             Otu0225 Otu0226 Otu0227 Otu0228 Otu0229 Otu0230 Otu0231
## Saanich_010       4      79       0       0       2       0      37
## Saanich_100     107      20       0       6      34       2     113
## Saanich_120      90      57       2      22      33      13      51
## Saanich_135      30      41      30      28      16      32      24
## Saanich_150       2      32     141      75      37      65       0
## Saanich_165       0       0      43      89      99     114       1
## Saanich_200       0       0      12       7       6       0       0
##             Otu0232 Otu0233 Otu0234 Otu0235 Otu0236 Otu0237 Otu0238
## Saanich_010       0       6       0       0       0       2       0
## Saanich_100     102     128      37       0      60     111       0
## Saanich_120      84      62      50       0     106      77       0
## Saanich_135      21      12      55       0      15      22       0
## Saanich_150      11       0      63       2      30       0       0
## Saanich_165       2      12      10       0       4       0     209
## Saanich_200       0       0       4     215       0       0       2
##             Otu0239 Otu0240 Otu0241 Otu0242 Otu0243 Otu0244 Otu0245
## Saanich_010     206     124     167       0     199       2       0
## Saanich_100       0      27      14      10       0      85       0
## Saanich_120       0      28      20      26       2      69       0
## Saanich_135       2      17       6      25       2      29       0
## Saanich_150       0      11       0       6       0      11       0
## Saanich_165       0       0       0     136       0       5     191
## Saanich_200       0       0       0       0       0       0      10
##             Otu0246 Otu0247 Otu0248 Otu0249 Otu0250 Otu0251 Otu0252
## Saanich_010     191       0       0       0     196       2       0
## Saanich_100       7       0      31       0       0      51      68
## Saanich_120       2       8      28       0       0      87      74
## Saanich_135       0      24      37       0       0      26      17
## Saanich_150       0     102     101       0       0      24      24
## Saanich_165       0      48       0       0       0       4      10
## Saanich_200       0      17       0     196       0       0       0
##             Otu0253 Otu0254 Otu0255 Otu0256 Otu0257 Otu0258 Otu0259
## Saanich_010       2       0       2       3       2       0      46
## Saanich_100     122       0      13      95      95       0      70
## Saanich_120      48       0      10      74      60       0      47
## Saanich_135      14       0      31      11      29      11      19
## Saanich_150       7       0      39       7       4      21       6
## Saanich_165       0       0      95       0       0     156       0
## Saanich_200       0     192       2       0       0       0       0
##             Otu0260 Otu0261 Otu0262 Otu0263 Otu0264 Otu0265 Otu0266
## Saanich_010     131       0       0       0     177      53     138
## Saanich_100      28       0       6      54       0      67      12
## Saanich_120      17       0      25      85       0      24       7
## Saanich_135      12       0      29      19       0       9      15
## Saanich_150       0       4      12      17       0       0       0
## Saanich_165       0     180      73       7       0      11       2
## Saanich_200       0       0      38       0       0      10       0
##             Otu0267 Otu0268 Otu0269 Otu0270 Otu0271 Otu0272 Otu0273
## Saanich_010       0       0     159       0       0     165     152
## Saanich_100      19       6       8      35      38       0       8
## Saanich_120      45      28       0      64      73       0       4
## Saanich_135      53      19       2      48      29       2       2
## Saanich_150      53      43       0      21      20       0       0
## Saanich_165       2      69       0       0       7       0       0
## Saanich_200       0       4       0       0       0       0       0
##             Otu0274 Otu0275 Otu0276 Otu0277 Otu0278 Otu0279 Otu0280
## Saanich_010       0       2       0       0       0       6       0
## Saanich_100      81      64      52      20       0      97       0
## Saanich_120      74      54      63      40       0      36       0
## Saanich_135      10      25      33      48       0      12       0
## Saanich_150       0       4      14      45       0       3       3
## Saanich_165       0      14       0       2       0       0     151
## Saanich_200       0       0       0       0     155       0       0
##             Otu0281 Otu0282 Otu0283 Otu0284 Otu0285 Otu0286 Otu0287
## Saanich_010       0       0       0       0     144       5      58
## Saanich_100      22       3       0       0       4      77      45
## Saanich_120      31      16       0       0       0      49      29
## Saanich_135      48      28       0       0       2      15      17
## Saanich_150      51      59       4       0       2       5       2
## Saanich_165       2      44      97       0       0       0       0
## Saanich_200       0       4      52     153       0       0       0
##             Otu0288 Otu0289 Otu0290 Otu0291 Otu0292 Otu0293 Otu0294
## Saanich_010       2     145       0       0       0       4       2
## Saanich_100      53       2      78      36     109      92      96
## Saanich_120      30       0      22      68      37      45      38
## Saanich_135      35       2       2      38       0       4       4
## Saanich_150      27       0       0       2       0       0       2
## Saanich_165       2       0       0       2       0       0       2
## Saanich_200       0       0      47       0       0       0       0
##             Otu0295 Otu0296 Otu0297 Otu0298 Otu0299 Otu0300 Otu0301
## Saanich_010     140       0       2       3     115       0       0
## Saanich_100       0       0      75      88      12       0      28
## Saanich_120       2       0      34      40       8       8      80
## Saanich_135       2      26      26       8       2       8      22
## Saanich_150       0      56       2       0       0      26       2
## Saanich_165       0      62       3       0       0      95       2
## Saanich_200       0       0       0       0       0       0       0
##             Otu0302 Otu0303 Otu0304 Otu0305 Otu0306 Otu0307 Otu0308
## Saanich_010       0       0       0      74       0       0       0
## Saanich_100      76      78      63      32      13       2       0
## Saanich_120      24      51      58      22      43       3       0
## Saanich_135      25       4      12       2      13       6       6
## Saanich_150       8       0       0       0      13       8      16
## Saanich_165       0       0       0       0      45     112      38
## Saanich_200       0       0       0       2       4       0      71
##             Otu0309 Otu0310 Otu0311 Otu0312 Otu0313 Otu0314 Otu0315
## Saanich_010       0       0       0       0       0     120       0
## Saanich_100       0       2      67       0       4       2      10
## Saanich_120       0      21      56       0      14       2      67
## Saanich_135       2      33       2       0      48       0      32
## Saanich_150       2      29       2       0      52       0      14
## Saanich_165     126      33       0       0       6       0       0
## Saanich_200       0      10       0     126       0       0       0
##             Otu0316 Otu0317 Otu0318 Otu0319 Otu0320 Otu0321 Otu0322
## Saanich_010      10      12       0      89      82       0     104
## Saanich_100      68      67       4      13      25       5       8
## Saanich_120      35      29      24       8      13       4       2
## Saanich_135       7      13      35      11       0      11       4
## Saanich_150       0       2      47       2       2      24       0
## Saanich_165       3       0      11       0       0      77       0
## Saanich_200       0       0       2       0       0       0       2
##             Otu0323 Otu0324 Otu0325 Otu0326 Otu0327 Otu0328 Otu0329
## Saanich_010       0       6      14       0     112      79     105
## Saanich_100       9      67      73       0       2      20       2
## Saanich_120      75      39      19       0       0       6       6
## Saanich_135      21       4      11       0       2       8       2
## Saanich_150      13       0       0       0       0       0       0
## Saanich_165       0       2       0       0       0       2       0
## Saanich_200       0       0       0     117       0       0       0
##             Otu0330 Otu0331 Otu0332 Otu0333 Otu0334 Otu0335 Otu0336
## Saanich_010       0       0       0       2       0       0     109
## Saanich_100      21      23      18      34       0      46       0
## Saanich_120      52      72      33      51       0      44       0
## Saanich_135      31      18       4       4       0      10       0
## Saanich_150      10       0       7       0       2       2       0
## Saanich_165       0       0      49      21       0       6       0
## Saanich_200       0       0       2       0     108       2       0
##             Otu0337 Otu0338 Otu0339 Otu0340 Otu0341 Otu0342 Otu0343
## Saanich_010     109       0       0      13       0       0       0
## Saanich_100       0       0       0      72       0      56      55
## Saanich_120       0      20      12      16       4      45      35
## Saanich_135       0      61       9       4       2       5       8
## Saanich_150       0      25      24       2       4       0       2
## Saanich_165       0       2      62       0      81       0       3
## Saanich_200       0       0       0       0      16       0       3
##             Otu0344 Otu0345 Otu0346 Otu0347 Otu0348 Otu0349 Otu0350
## Saanich_010       0      86       0       0     102       0       0
## Saanich_100      20       8      25      27       0      72       2
## Saanich_120      23       6      50      42       0      26      11
## Saanich_135      19       4      18      17       0       2       7
## Saanich_150      18       0       8      16       0       0       4
## Saanich_165      25       0       3       0       0       2      62
## Saanich_200       0       0       0       0       0       0      15
##             Otu0351 Otu0352 Otu0353 Otu0354 Otu0355 Otu0356 Otu0357
## Saanich_010       0       0      79       4      90       0      19
## Saanich_100      25       0       4      65       0       8      48
## Saanich_120      27       0       7      28       2      24       3
## Saanich_135       9       0       6       2       4      12      25
## Saanich_150      10       0       0       0       2       5       2
## Saanich_165      30       0       4       0       0      42       0
## Saanich_200       0     100       0       0       0       7       0
##             Otu0358 Otu0359 Otu0360 Otu0361 Otu0362 Otu0363 Otu0364
## Saanich_010      96       0       6       0       2       0       0
## Saanich_100       0      15      47       0      40       6      47
## Saanich_120       0      51      23       0      40      13      31
## Saanich_135       0      15      16       0      10      17       6
## Saanich_150       0       4       2       2       0      41       0
## Saanich_165       0      10       0       0       0      13       6
## Saanich_200       0       0       0      91       0       0       0
##             Otu0365 Otu0366 Otu0367 Otu0368 Otu0369 Otu0370 Otu0371
## Saanich_010       0       0      23       0      88      51       0
## Saanich_100      12       0      24       2       0      13       3
## Saanich_120      31       0      24      12       0       9      18
## Saanich_135      16       0      14       6       0       5       4
## Saanich_150      30       0       2      15       0       6       2
## Saanich_165       0       0       2      54       0       2      51
## Saanich_200       0      89       0       0       0       2      10
##             Otu0372 Otu0373 Otu0374 Otu0375 Otu0376 Otu0377 Otu0378
## Saanich_010      86       0       0       0       6       0      35
## Saanich_100       0       6      34       0       0      17       5
## Saanich_120       0      20      41       0      76      27       2
## Saanich_135       2      32      12       0       0      23       0
## Saanich_150       0      13       0       0       4      19       0
## Saanich_165       0      12       0       0       0       0       0
## Saanich_200       0       4       0      87       0       0      43
##             Otu0379 Otu0380 Otu0381 Otu0382 Otu0383 Otu0384 Otu0385
## Saanich_010      85       0      61       0       0       0       0
## Saanich_100       0       6      16      63       0       8       0
## Saanich_120       0      30       7      17       6       9       0
## Saanich_135       0      21       0       4      14      18       0
## Saanich_150       0      23       0       0       4      33       0
## Saanich_165       0       2       0       0      59      12       0
## Saanich_200       0       2       0       0       0       3      81
##             Otu0386 Otu0387 Otu0388 Otu0389 Otu0390 Otu0391 Otu0392
## Saanich_010       0      73       7       0       0       0      79
## Saanich_100       0       4      55       2      59      48       0
## Saanich_120       0       2      16       0      16      31       0
## Saanich_135       0       2       2      11       0       0       0
## Saanich_150       0       0       0       7       2       0       0
## Saanich_165      74       0       0      53       2       0       0
## Saanich_200       7       0       0       6       0       0       0
##             Otu0393 Otu0394 Otu0395 Otu0396 Otu0397 Otu0398 Otu0399
## Saanich_010       0      76       0       0       0       0       0
## Saanich_100       6       0       0       0       0       0      46
## Saanich_120       8       2       0       0       0       8      19
## Saanich_135      28       0       0       0       0       7      10
## Saanich_150      10       0       0       0       0      35       0
## Saanich_165      23       0       0       0       0      24       0
## Saanich_200       3       0      78      76      76       2       0
##             Otu0400 Otu0401 Otu0402 Otu0403 Otu0404 Otu0405 Otu0406
## Saanich_010       0       0       0      52      70       0       0
## Saanich_100       0       4       2      14       0      11       0
## Saanich_120       0      49      12       0       0      28       0
## Saanich_135       0      12      12       8       0       2       0
## Saanich_150       4      10      25       0       0       0       0
## Saanich_165       2       0      18       0       0      28       0
## Saanich_200      69       0       6       0       4       5      73
##             Otu0407 Otu0408 Otu0409 Otu0410 Otu0411 Otu0412 Otu0413
## Saanich_010       0       0       0      24       0      42      16
## Saanich_100       0       6       0      19       0      28       0
## Saanich_120       0       8       6      18       0       2       0
## Saanich_135       0      24       9       9       0       0       0
## Saanich_150       0      32      22       2       0       0      56
## Saanich_165       5       2      35       0       0       0       0
## Saanich_200      67       0       0       0      72       0       0
##             Otu0414 Otu0415 Otu0416 Otu0417 Otu0418 Otu0419 Otu0420
## Saanich_010      41       0       0       0       0       0       0
## Saanich_100      20       2      31      25      32       8      16
## Saanich_120       8       3      28      26      23      32      50
## Saanich_135       2      13      12      20       2      13       2
## Saanich_150       0      31       0       0       2      17       2
## Saanich_165       0      22       0       0      12       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu0421 Otu0422 Otu0423 Otu0424 Otu0425 Otu0426 Otu0427
## Saanich_010       0      62       0       0       0      14       0
## Saanich_100       0       3       0       0      46      34       0
## Saanich_120       0       0       4       0      20      16       0
## Saanich_135       2       4      10       2       2       4       0
## Saanich_150       0       0      19       0       0       0       0
## Saanich_165       2       0      36      67       0       0       0
## Saanich_200      66       0       0       0       0       0      68
##             Otu0428 Otu0429 Otu0430 Otu0431 Otu0432 Otu0433 Otu0434
## Saanich_010      68       0      12       0      27       0       0
## Saanich_100       0      35       0      23      16       4      15
## Saanich_120       0      30       0      36      17       6      22
## Saanich_135       0       3       0       8       5       2      18
## Saanich_150       0       0       0       0       2      13      11
## Saanich_165       0       0       0       0       0       7       0
## Saanich_200       0       0      55       0       0      35       0
##             Otu0435 Otu0436 Otu0437 Otu0438 Otu0439 Otu0440 Otu0441
## Saanich_010      66      66       0       0      39       0       0
## Saanich_100       0       0       0       2      16      26       0
## Saanich_120       0       0       0       0       4      37       0
## Saanich_135       0       0       4      20       7       2       0
## Saanich_150       0       0      15       8       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0      47      36       0       0      64
##             Otu0442 Otu0443 Otu0444 Otu0445 Otu0446 Otu0447 Otu0448
## Saanich_010       0       0       5       0       0       0       0
## Saanich_100      39      20      31      31       4      30      39
## Saanich_120      16      36      21      24      23      33      16
## Saanich_135       9       4       4       8       9       0       7
## Saanich_150       0       0       2       0      23       0       0
## Saanich_165       0       4       0       0       4       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu0449 Otu0450 Otu0451 Otu0452 Otu0453 Otu0454 Otu0455
## Saanich_010       0      60       0       0       0       0       0
## Saanich_100       0       0       2       0      25      20       3
## Saanich_120       0       2      11       4      32      26       5
## Saanich_135       0       0      13       0       4       6       2
## Saanich_150       0       0      27       7       0       5      15
## Saanich_165       0       0       9      50       0       4      32
## Saanich_200      62       0       0       0       0       0       4
##             Otu0456 Otu0457 Otu0458 Otu0459 Otu0460 Otu0461 Otu0462
## Saanich_010       0      59      16       0       0      54       0
## Saanich_100      25       0      26       0      17       0      10
## Saanich_120      10       0       7       0      32       0      15
## Saanich_135      13       0      10       4       8       4       4
## Saanich_150      12       0       0       6       2       0       0
## Saanich_165       0       0       0      47       0       0      24
## Saanich_200       0       0       0       2       0       0       5
##             Otu0463 Otu0464 Otu0465 Otu0466 Otu0467 Otu0468 Otu0469
## Saanich_010      49       2       0      12       0       0       0
## Saanich_100       9      42       0      25      29       0       0
## Saanich_120       0      13       0      13      21      11       0
## Saanich_135       0       0       0       6       4      28       0
## Saanich_150       0       0       2       0       2      17       0
## Saanich_165       0       0       9       0       0       0       0
## Saanich_200       0       0      45       0       0       0      55
##             Otu0470 Otu0471 Otu0472 Otu0473 Otu0474 Otu0475 Otu0476
## Saanich_010       0       2       7       2       0       0      14
## Saanich_100      15      20      34      33      16       0      20
## Saanich_120      37      17       4      15       4      10      17
## Saanich_135       3      10       5       4      16       6       0
## Saanich_150       0       2       0       0      13      23       2
## Saanich_165       0       4       0       0       4      12       0
## Saanich_200       0       0       4       0       0       2       0
##             Otu0477 Otu0478 Otu0479 Otu0480 Otu0481 Otu0482 Otu0483
## Saanich_010       0      52       0       0       0       0      51
## Saanich_100       0       0      17       3      28       0       0
## Saanich_120       2       0      28      10      21       0       0
## Saanich_135       3       0       7      21       2       0       0
## Saanich_150       2       0       0      15       0       0       0
## Saanich_165      43       0       0       3       0       2       0
## Saanich_200       2       0       0       0       0      49       0
##             Otu0484 Otu0485 Otu0486 Otu0487 Otu0488 Otu0489 Otu0490
## Saanich_010      51       0      20      48       0       0       0
## Saanich_100       0      31      23       0      17       0       0
## Saanich_120       0      16       6       0      29       4       0
## Saanich_135       0       2       2       0       4       2       0
## Saanich_150       0       2       0       0       0       0       0
## Saanich_165       0       0       0       0       0       2       4
## Saanich_200       0       0       0       2       0      42      46
##             Otu0491 Otu0492 Otu0493 Otu0494 Otu0495 Otu0496 Otu0497
## Saanich_010      13       0       0       0       0       0       0
## Saanich_100      16       0       2       0       0      23       0
## Saanich_120      17       0      18       6       0      16       0
## Saanich_135       3       3      12       8       0       7       0
## Saanich_150       0       8       0      13      43       2       0
## Saanich_165       0      38      12      22       6       0       0
## Saanich_200       0       0       5       0       0       0      48
##             Otu0498 Otu0499 Otu0500 Otu0501 Otu0502 Otu0503 Otu0504
## Saanich_010       0      48      46      48      25      31      48
## Saanich_100       9       0       0       0      15       8       0
## Saanich_120      23       0       0       0       6       2       0
## Saanich_135      14       0       2       0       2       7       0
## Saanich_150       2       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu0505 Otu0506 Otu0507 Otu0508 Otu0509 Otu0510 Otu0511
## Saanich_010       0      18      44       0       0      44      44
## Saanich_100       0      10       0       0       8       0       2
## Saanich_120       0      14       0       8       9       0       0
## Saanich_135       0       5       2       5      19       2       0
## Saanich_150       2       0       0      15       8       0       0
## Saanich_165       0       0       0      18       2       0       0
## Saanich_200      45       0       0       0       0       0       0
##             Otu0512 Otu0513 Otu0514 Otu0515 Otu0516 Otu0517 Otu0518
## Saanich_010       0       0      46       0       0      45       2
## Saanich_100      14       0       0       4       4       0      21
## Saanich_120       9       0       0      34      28       0      12
## Saanich_135      12       0       0       0      11       0      10
## Saanich_150       5       0       0       6       2       0       0
## Saanich_165       6       2       0       2       0       0       0
## Saanich_200       0      44       0       0       0       0       0
##             Otu0519 Otu0520 Otu0521 Otu0522 Otu0523 Otu0524 Otu0525
## Saanich_010       0       0       0       2       0      44       0
## Saanich_100      28       0       9      34       0       0       0
## Saanich_120      10       4      18       9       0       0       9
## Saanich_135       7       4      11       0       0       0      18
## Saanich_150       0      23       0       0       0       0       6
## Saanich_165       0      14       7       0      44       0      11
## Saanich_200       0       0       0       0       0       0       0
##             Otu0526 Otu0527 Otu0528 Otu0529 Otu0530 Otu0531 Otu0532
## Saanich_010       0       0      42       0       0      11       0
## Saanich_100       2      18       0       0       3      14       0
## Saanich_120      10      23       0       0      14       4       0
## Saanich_135      13       3       2       0       5      11       0
## Saanich_150      19       0       0       0      20       4       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0      44       2       0      43
##             Otu0533 Otu0534 Otu0535 Otu0536 Otu0537 Otu0538 Otu0539
## Saanich_010       0      43       4       0      42       0       2
## Saanich_100       7       0      24       2       0       0       0
## Saanich_120      26       0       7       9       0      13       4
## Saanich_135       7       0       2      12       0      17       0
## Saanich_150       3       0       2      18       0      12       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       4       2       0       0      36
##             Otu0540 Otu0541 Otu0542 Otu0543 Otu0544 Otu0545 Otu0546
## Saanich_010       0       0      29       0       7       0       0
## Saanich_100      10       0       2       4       9       0       0
## Saanich_120       7      12       0      11      21       2       0
## Saanich_135       8      16       0       6       2       4       0
## Saanich_150       8      13       0       2       2      18       0
## Saanich_165       6       0       0      18       0       7       0
## Saanich_200       2       0      10       0       0      10      41
##             Otu0547 Otu0548 Otu0549 Otu0550 Otu0551 Otu0552 Otu0553
## Saanich_010      39       0       0       0       0       0       7
## Saanich_100       2      12       0       9       0      11      15
## Saanich_120       0      19       4      12       2      20      14
## Saanich_135       0      10       0      13       0       8       5
## Saanich_150       0       0       0       7       6       2       0
## Saanich_165       0       0      37       0      33       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu0554 Otu0555 Otu0556 Otu0557 Otu0558 Otu0559 Otu0560
## Saanich_010       0      28      40       0       0       0       0
## Saanich_100       0       6       0      31       0      16      11
## Saanich_120       0       2       0       7       0      15      20
## Saanich_135       0       2       0       2       0       4       4
## Saanich_150       0       2       0       0       0       4       4
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200      41       0       0       0      40       0       0
##             Otu0561 Otu0562 Otu0563 Otu0564 Otu0565 Otu0566 Otu0567
## Saanich_010       2      19       0       0      39       0       0
## Saanich_100      25       6       0      15       0       0       7
## Saanich_120      10       8       0      11       0       0      15
## Saanich_135       0       4       0       6       0       0      15
## Saanich_150       0       2       2       0       0       0       2
## Saanich_165       2       0      23       7       0       0       0
## Saanich_200       0       0      14       0       0      39       0
##             Otu0568 Otu0569 Otu0570 Otu0571 Otu0572 Otu0573 Otu0574
## Saanich_010       0      34       0       0      20      38       0
## Saanich_100       0       0       0       5      12       0       2
## Saanich_120      18       0       0      10       4       0      30
## Saanich_135       8       4       0       2       2       0       2
## Saanich_150       4       0       0      15       0       0       4
## Saanich_165       7       0      38       6       0       0       0
## Saanich_200       2       0       0       0       0       0       0
##             Otu0575 Otu0576 Otu0577 Otu0578 Otu0579 Otu0580 Otu0581
## Saanich_010      22      20       0       0       0       2      35
## Saanich_100       0       9      10       4       0      29       2
## Saanich_120       2       4      11      16       0       6       0
## Saanich_135       0       0      16      11       0       0       0
## Saanich_150       0       4       0       6       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200      14       0       0       0      37       0       0
##             Otu0582 Otu0583 Otu0584 Otu0585 Otu0586 Otu0587 Otu0588
## Saanich_010       0       0       0       0       0      36       0
## Saanich_100       0       0       0      14      11       0      25
## Saanich_120       0       0       0      19       9       0      11
## Saanich_135       2       0       0       4       9       0       0
## Saanich_150      26       0       6       0       7       0       0
## Saanich_165       9       2      31       0       0       0       0
## Saanich_200       0      35       0       0       0       0       0
##             Otu0589 Otu0590 Otu0591 Otu0592 Otu0593 Otu0594 Otu0595
## Saanich_010       2       0      34       0       0       0       0
## Saanich_100      14      13       0       9      13       8       0
## Saanich_120      10      18       2      18      13       6       4
## Saanich_135      10       5       0       6       7      17       0
## Saanich_150       0       0       0       2       2       4       4
## Saanich_165       0       0       0       0       0       0      25
## Saanich_200       0       0       0       0       0       0       2
##             Otu0596 Otu0597 Otu0598 Otu0599 Otu0600 Otu0601 Otu0602
## Saanich_010       0      35       0      21       0      15       0
## Saanich_100       0       0       0      10       8       6       0
## Saanich_120       0       0       8       2      14       2       0
## Saanich_135       0       0      16       0       2       5       0
## Saanich_150       0       0       2       0       0       0       0
## Saanich_165       0       0       9       2       8       7      30
## Saanich_200      35       0       0       0       3       0       4
##             Otu0603 Otu0604 Otu0605 Otu0606 Otu0607 Otu0608 Otu0609
## Saanich_010      34       0       0       2       0       6      33
## Saanich_100       0      14      17      24       0      22       1
## Saanich_120       0      15       9       6       2       6       0
## Saanich_135       0       5       4       2       0       0       0
## Saanich_150       0       0       4       0      10       0       0
## Saanich_165       0       0       0       0      22       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu0610 Otu0611 Otu0612 Otu0613 Otu0614 Otu0615 Otu0616
## Saanich_010       0       0       0       2       0       2       0
## Saanich_100      23      14       3      16       0      11       2
## Saanich_120       6      19       6      11       0      16       5
## Saanich_135       4       0       9       0       0       4       7
## Saanich_150       0       0       9       0       0       0       9
## Saanich_165       0       0       4       4       0       0      10
## Saanich_200       0       0       2       0      33       0       0
##             Otu0617 Otu0618 Otu0619 Otu0620 Otu0621 Otu0622 Otu0623
## Saanich_010       0      14       0       0      28      28       0
## Saanich_100      17      14       5       0       3       4       0
## Saanich_120      16       5      16       0       0       0       0
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       0       0      12       0       0       0       0
## Saanich_165       0       0       0      29       0       0       0
## Saanich_200       0       0       0       4       0       0      32
##             Otu0624 Otu0625 Otu0626 Otu0627 Otu0628 Otu0629 Otu0630
## Saanich_010       0       0       2       2       0      32       0
## Saanich_100       0       0      13      24       0       0       2
## Saanich_120       0       0       9       4       0       0      20
## Saanich_135       0       0       8       2       0       0       6
## Saanich_150       0       0       0       0       4       0       2
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200      32      32       0       0      28       0       0
##             Otu0631 Otu0632 Otu0633 Otu0634 Otu0635 Otu0636 Otu0637
## Saanich_010      31       2       2       0       0       0       0
## Saanich_100       0      14       0       0       0       0       0
## Saanich_120       0      15      29       0       0       0       0
## Saanich_135       0       0       0       2       0       0      10
## Saanich_150       0       0       0       0       0       0       8
## Saanich_165       0       0       0      27       0       0      13
## Saanich_200       0       0       0       2      31      31       0
##             Otu0638 Otu0639 Otu0640 Otu0641 Otu0642 Otu0643 Otu0644
## Saanich_010       0       0      21       0       0       0      10
## Saanich_100       2      10       8       0       6       4       9
## Saanich_120      10      11       2       0      19       6       2
## Saanich_135       9       0       0       0       5      17       7
## Saanich_150       6       2       0       5       0       3       0
## Saanich_165       4       4       0       0       0       0       0
## Saanich_200       0       4       0      26       0       0       2
##             Otu0645 Otu0646 Otu0647 Otu0648 Otu0649 Otu0650 Otu0651
## Saanich_010      30      30       0       0       0       0       0
## Saanich_100       0       0      30       2       0       0       2
## Saanich_120       0       0       0       9       0       0      10
## Saanich_135       0       0       0       4       0       0       8
## Saanich_150       0       0       0       2       0       0       2
## Saanich_165       0       0       0      13       2       0       8
## Saanich_200       0       0       0       0      28      30       0
##             Otu0652 Otu0653 Otu0654 Otu0655 Otu0656 Otu0657 Otu0658
## Saanich_010       9       0       2      27       0      29      25
## Saanich_100      15       4       6       0       9       0       2
## Saanich_120       6       8       2       2      12       0       0
## Saanich_135       0       9       2       0       4       0       2
## Saanich_150       0       8       0       0       4       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0      17       0       0       0       0
##             Otu0659 Otu0660 Otu0661 Otu0662 Otu0663 Otu0664 Otu0665
## Saanich_010       0      29       0       0       0      28       0
## Saanich_100       2       0      18       0       0       0       2
## Saanich_120       6       0      11       0       0       0       7
## Saanich_135       5       0       0       0       0       0       9
## Saanich_150      10       0       0       0       0       0       8
## Saanich_165       6       0       0       0      26       0       2
## Saanich_200       0       0       0      29       2       0       0
##             Otu0666 Otu0667 Otu0668 Otu0669 Otu0670 Otu0671 Otu0672
## Saanich_010       0       0       0      20       0       0      14
## Saanich_100       0       0       0       6       8       0       4
## Saanich_120       0      16       2       2      16       0       6
## Saanich_135       2       4       0       0       2       0       4
## Saanich_150       7       6       6       0       2       0       0
## Saanich_165       8       2      14       0       0       0       0
## Saanich_200      11       0       6       0       0      28       0
##             Otu0673 Otu0674 Otu0675 Otu0676 Otu0677 Otu0678 Otu0679
## Saanich_010       2      19      25      16       0       0       0
## Saanich_100      17       6       0       0       0       6       0
## Saanich_120       7       2       0       7       2      10       0
## Saanich_135       2       0       0       4       9       5       2
## Saanich_150       0       0       0       0      16       6      22
## Saanich_165       0       0       0       0       0       0       3
## Saanich_200       0       0       2       0       0       0       0
##             Otu0680 Otu0681 Otu0682 Otu0683 Otu0684 Otu0685 Otu0686
## Saanich_010       0      19       0      27       0       0       0
## Saanich_100       2       2      18       0      10       0       4
## Saanich_120       0       4       9       0       8       0      15
## Saanich_135       0       0       0       0       7       0       7
## Saanich_150       4       2       0       0       2       0       0
## Saanich_165      17       0       0       0       0       0       0
## Saanich_200       4       0       0       0       0      27       0
##             Otu0687 Otu0688 Otu0689 Otu0690 Otu0691 Otu0692 Otu0693
## Saanich_010       0       0       0       0       0       2       0
## Saanich_100       0       0       0       0       5      24       0
## Saanich_120       2       4       7       0      10       0       0
## Saanich_135       2       7       2       2       5       0       0
## Saanich_150      19       2      14       0       0       0       0
## Saanich_165       3       2       3      21       6       0       0
## Saanich_200       0      11       0       3       0       0      26
##             Otu0694 Otu0695 Otu0696 Otu0697 Otu0698 Otu0699 Otu0700
## Saanich_010       0       0      25       0      23       0       0
## Saanich_100       0      18       0      25       0      10      12
## Saanich_120       0       5       0       0       0      11      11
## Saanich_135       0       2       0       0       2       2       2
## Saanich_150       0       0       0       0       0       2       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200      26       0       0       0       0       0       0
##             Otu0701 Otu0702 Otu0703 Otu0704 Otu0705 Otu0706 Otu0707
## Saanich_010       0       0      18       0       5       0       0
## Saanich_100       0       0       5       0      15       0       0
## Saanich_120       0       0       0       0       3      12       0
## Saanich_135       2       0       0       0       2       7       2
## Saanich_150       2       2       2       0       0       6       2
## Saanich_165      10      16       0       0       0       0      21
## Saanich_200      11       7       0      25       0       0       0
##             Otu0708 Otu0709 Otu0710 Otu0711 Otu0712 Otu0713 Otu0714
## Saanich_010       0      25       0      13       0       0       0
## Saanich_100       0       0       0       2       0       5       0
## Saanich_120       0       0       0       0       0      12       0
## Saanich_135       0       0       0       6       0       2       0
## Saanich_150       0       0       0       2       2       0       8
## Saanich_165       0       0       2       2      23       6      16
## Saanich_200      25       0      23       0       0       0       0
##             Otu0715 Otu0716 Otu0717 Otu0718 Otu0719 Otu0720 Otu0721
## Saanich_010       0       0       0       0      24      10       0
## Saanich_100       0      20       0       0       0      12       0
## Saanich_120       0       2       4       2       0       0       4
## Saanich_135       0       2       6       7       0       2       0
## Saanich_150       0       0       4       2       0       0       0
## Saanich_165      22       0       6      13       0       0      20
## Saanich_200       2       0       4       0       0       0       0
##             Otu0722 Otu0723 Otu0724 Otu0725 Otu0726 Otu0727 Otu0728
## Saanich_010       0      24       0       0       2       0       9
## Saanich_100       8       0       0       0      17       0      11
## Saanich_120      12       0       0       9       3      17       2
## Saanich_135       4       0       0       0       0       5       2
## Saanich_150       0       0       5       2       2       2       0
## Saanich_165       0       0      15      13       0       0       0
## Saanich_200       0       0       4       0       0       0       0
##             Otu0729 Otu0730 Otu0731 Otu0732 Otu0733 Otu0734 Otu0735
## Saanich_010      24      24       0       0       0       6       6
## Saanich_100       0       0       0       0       0       0       9
## Saanich_120       0       0       2       0       0       8       5
## Saanich_135       0       0       2       0       0       0       2
## Saanich_150       0       0       3       0       0      10       2
## Saanich_165       0       0      17       0       0       0       0
## Saanich_200       0       0       0      24      24       0       0
##             Otu0736 Otu0737 Otu0738 Otu0739 Otu0740 Otu0741 Otu0742
## Saanich_010       0       0       0       2       0      23       0
## Saanich_100      12       2       0       9       0       0       0
## Saanich_120      10       3       5      10       2       0       0
## Saanich_135       2       6       4       2       6       0       0
## Saanich_150       0      12       6       0      15       0       0
## Saanich_165       0       0       8       0       0       0       2
## Saanich_200       0       0       0       0       0       0      21
##             Otu0743 Otu0744 Otu0745 Otu0746 Otu0747 Otu0748 Otu0749
## Saanich_010       0       0       0       2       0       0       0
## Saanich_100       0       6      15      15       0       0       9
## Saanich_120       9       0       8       6       0       0      10
## Saanich_135      13       8       0       0       0      11       4
## Saanich_150       1       9       0       0       0      12       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0      23       0       0
##             Otu0750 Otu0751 Otu0752 Otu0753 Otu0754 Otu0755 Otu0756
## Saanich_010      23       0       0       2       0      10      16
## Saanich_100       0       0       0      12       2       0       2
## Saanich_120       0       0       0       9       8       0       4
## Saanich_135       0       2       0       0       4       0       0
## Saanich_150       0       9       3       0       0       0       0
## Saanich_165       0       9       7       0       9       0       0
## Saanich_200       0       3      13       0       0      12       0
##             Otu0757 Otu0758 Otu0759 Otu0760 Otu0761 Otu0762 Otu0763
## Saanich_010       0       0      20      16      22       0       0
## Saanich_100       0      17       0       0       0       0      10
## Saanich_120       0       5       0       0       0       0       8
## Saanich_135       0       0       2       4       0       0       2
## Saanich_150       0       0       0       0       0       0       2
## Saanich_165      22       0       0       0       0      20       0
## Saanich_200       0       0       0       2       0       2       0
##             Otu0764 Otu0765 Otu0766 Otu0767 Otu0768 Otu0769 Otu0770
## Saanich_010       0       0      13      22       0       0       0
## Saanich_100       0       0       2       0       6       0       0
## Saanich_120       0       0       2       0      16       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       5       0       0       0       0
## Saanich_200      22      22       0       0       0      22      22
##             Otu0771 Otu0772 Otu0773 Otu0774 Otu0775 Otu0776 Otu0777
## Saanich_010       2       0      18      18       0       0       0
## Saanich_100       4       7       0       2       0       4       0
## Saanich_120       2       2       0       2       0      12       9
## Saanich_135       6       2       2       0       0       6       8
## Saanich_150       8       5       2       0       2       0       4
## Saanich_165       0       6       0       0       6       0       0
## Saanich_200       0       0       0       0      14       0       0
##             Otu0778 Otu0779 Otu0780 Otu0781 Otu0782 Otu0783 Otu0784
## Saanich_010       0       0       0       0       0      21      17
## Saanich_100       2       0       0       9       0       0       2
## Saanich_120      14       0       0      10      21       0       2
## Saanich_135       0       0       2       0       0       0       0
## Saanich_150       5       0       0       2       0       0       0
## Saanich_165       0      21       2       0       0       0       0
## Saanich_200       0       0      17       0       0       0       0
##             Otu0785 Otu0786 Otu0787 Otu0788 Otu0789 Otu0790 Otu0791
## Saanich_010       0      21      21       0       0       0       0
## Saanich_100       5       0       0       0       0       4       0
## Saanich_120       5       0       0       0       0       2       0
## Saanich_135       7       0       0       0       0      11       0
## Saanich_150       4       0       0       0       0       4       0
## Saanich_165       0       0       0      21       3       0       0
## Saanich_200       0       0       0       0      18       0      21
##             Otu0792 Otu0793 Otu0794 Otu0795 Otu0796 Otu0797 Otu0798
## Saanich_010      19      21      10      21      10       0       0
## Saanich_100       0       0       4       0       2       0       7
## Saanich_120       0       0       5       0       2      21      11
## Saanich_135       2       0       2       0       3       0       2
## Saanich_150       0       0       0       0       4       0       0
## Saanich_165       0       0       0       0       0       0       1
## Saanich_200       0       0       0       0       0       0       0
##             Otu0799 Otu0800 Otu0801 Otu0802 Otu0803 Otu0804 Otu0805
## Saanich_010       0       6       0       0       0       0       0
## Saanich_100       0      13      10       0       0      10       0
## Saanich_120       0       2       9       0       0       8       2
## Saanich_135       2       0       2       2       0       0       4
## Saanich_150       2       0       0       6       0       0       6
## Saanich_165       0       0       0       7      20       2       8
## Saanich_200      17       0       0       5       0       0       0
##             Otu0806 Otu0807 Otu0808 Otu0809 Otu0810 Otu0811 Otu0812
## Saanich_010      18       0       0       0       0      20       0
## Saanich_100       0       0       0       0       8       0      10
## Saanich_120       0       8       4       2      10       0       8
## Saanich_135       0       4       2      14       0       0       2
## Saanich_150       0       4       6       2       0       0       0
## Saanich_165       0       4       8       2       2       0       0
## Saanich_200       2       0       0       0       0       0       0
##             Otu0813 Otu0814 Otu0815 Otu0816 Otu0817 Otu0818 Otu0819
## Saanich_010      18       2       0       0      14       0       0
## Saanich_100       0       8      16       2       0       0       0
## Saanich_120       2       6       4       2       6       0       2
## Saanich_135       0       4       0       4       0       0       2
## Saanich_150       0       0       0       8       0       2       2
## Saanich_165       0       0       0       4       0      18      14
## Saanich_200       0       0       0       0       0       0       0
##             Otu0820 Otu0821 Otu0822 Otu0823 Otu0824 Otu0825 Otu0826
## Saanich_010      20       2       0       0       4       0       0
## Saanich_100       0       8       7       0      12       0       2
## Saanich_120       0      10      11       0       2       0       2
## Saanich_135       0       0       2       0       2       0       0
## Saanich_150       0       0       0       0       0       0       9
## Saanich_165       0       0       0       0       0       0       6
## Saanich_200       0       0       0      20       0      19       0
##             Otu0827 Otu0828 Otu0829 Otu0830 Otu0831 Otu0832 Otu0833
## Saanich_010       0       3       0       0      12       0      19
## Saanich_100       0       8       2       0       3       0       0
## Saanich_120       0       6       2       0       0       0       0
## Saanich_135       4       2       4       4       4       0       0
## Saanich_150       7       0       6      15       0       0       0
## Saanich_165       8       0       5       0       0       0       0
## Saanich_200       0       0       0       0       0      19       0
##             Otu0834 Otu0835 Otu0836 Otu0837 Otu0838 Otu0839 Otu0840
## Saanich_010       0       0       0       2       0      11       0
## Saanich_100       2       7       2      13       6       6       0
## Saanich_120       4       8       6       4       4       0       0
## Saanich_135       0       2       7       0       7       2       0
## Saanich_150       0       2       4       0       2       0       7
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200      13       0       0       0       0       0      12
##             Otu0841 Otu0842 Otu0843 Otu0844 Otu0845 Otu0846 Otu0847
## Saanich_010       0      11       0       0       0       0       0
## Saanich_100      11       6       0       7       0      19      10
## Saanich_120       8       0       0      10       0       0       6
## Saanich_135       0       2       0       2       0       0       3
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0      19       0      17       0       0
## Saanich_200       0       0       0       0       2       0       0
##             Otu0848 Otu0849 Otu0850 Otu0851 Otu0852 Otu0853 Otu0854
## Saanich_010       0       0       0       0       0       0      14
## Saanich_100       0       0      17       0       8       0       4
## Saanich_120       0       0       2       6      10       2       0
## Saanich_135       0       0       0      10       0       0       0
## Saanich_150       0       0       0       0       0       4       0
## Saanich_165       0       0       0       0       0      12       0
## Saanich_200      19      19       0       2       0       0       0
##             Otu0855 Otu0856 Otu0857 Otu0858 Otu0859 Otu0860 Otu0861
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       6       0       2      14       0       2
## Saanich_120       0      10       0       6       4       0       2
## Saanich_135       0       2       0       8       0       0       4
## Saanich_150       0       0       0       2       0       0       2
## Saanich_165       0       0       0       0       0       2       8
## Saanich_200      18       0      18       0       0      16       0
##             Otu0862 Otu0863 Otu0864 Otu0865 Otu0866 Otu0867 Otu0868
## Saanich_010       8       0       0      18       0       0      18
## Saanich_100       0       0      18       0      11       9       0
## Saanich_120       5       0       0       0       7       9       0
## Saanich_135       3       0       0       0       0       0       0
## Saanich_150       2       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0      18       0       0       0       0       0
##             Otu0869 Otu0870 Otu0871 Otu0872 Otu0873 Otu0874 Otu0875
## Saanich_010      18       0      14      16       0       0      18
## Saanich_100       0       0       2       0      10       0       0
## Saanich_120       0       0       2       2       8       0       0
## Saanich_135       0       0       0       0       0       2       0
## Saanich_150       0       0       0       0       0       2       0
## Saanich_165       0       0       0       0       0       6       0
## Saanich_200       0      18       0       0       0       8       0
##             Otu0876 Otu0877 Otu0878 Otu0879 Otu0880 Otu0881 Otu0882
## Saanich_010       0       4       4       0       0       0       0
## Saanich_100      10      10       9       2       2       2       0
## Saanich_120       6       4       2      13       6       7       5
## Saanich_135       2       0       0       2       7       2       7
## Saanich_150       0       0       2       0       0       6       5
## Saanich_165       0       0       0       0       2       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu0883 Otu0884 Otu0885 Otu0886 Otu0887 Otu0888 Otu0889
## Saanich_010       0       0      17       0       0       0       0
## Saanich_100       4       7       0       0       6       6       0
## Saanich_120       5       5       0       0      10       8       0
## Saanich_135       8       5       0       0       0       3       0
## Saanich_150       0       0       0       0       1       0       0
## Saanich_165       0       0       0      15       0       0       2
## Saanich_200       0       0       0       2       0       0      15
##             Otu0890 Otu0891 Otu0892 Otu0893 Otu0894 Otu0895 Otu0896
## Saanich_010       0      17       0       0       0       1      17
## Saanich_100      11       0      15       0       0      11       0
## Saanich_120       2       0       2       2       2       3       0
## Saanich_135       0       0       0       2       0       0       0
## Saanich_150       0       0       0       6       5       2       0
## Saanich_165       0       0       0       7      10       0       0
## Saanich_200       4       0       0       0       0       0       0
##             Otu0897 Otu0898 Otu0899 Otu0900 Otu0901 Otu0902 Otu0903
## Saanich_010       0       4       0       8       0       0       0
## Saanich_100       2       0      12       9       0       0      11
## Saanich_120       8      13       2       0       0       4       6
## Saanich_135       3       0       3       0       2       0       0
## Saanich_150       2       0       0       0       2       4       0
## Saanich_165       2       0       0       0      13       7       0
## Saanich_200       0       0       0       0       0       2       0
##             Otu0904 Otu0905 Otu0906 Otu0907 Otu0908 Otu0909 Otu0910
## Saanich_010      10      16       8       0       0       0      16
## Saanich_100       2       0       4      10       0       0       0
## Saanich_120       2       0       0       4       0       2       0
## Saanich_135       2       0       2       2       2       0       0
## Saanich_150       0       0       2       0       4       0       0
## Saanich_165       0       0       0       0      10       0       0
## Saanich_200       0       0       0       0       0      14       0
##             Otu0911 Otu0912 Otu0913 Otu0914 Otu0915 Otu0916 Otu0917
## Saanich_010      12       0      14       0       2      12      16
## Saanich_100       4       0       2       0       0       2       0
## Saanich_120       0      16       0       0       8       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       6       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0      16       0       0       0
##             Otu0918 Otu0919 Otu0920 Otu0921 Otu0922 Otu0923 Otu0924
## Saanich_010       0       0       0       2       6      16       0
## Saanich_100       0       0       0       7       8       0      13
## Saanich_120       0       0       5       7       0       0       3
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       2       4       2       0       0       0       0
## Saanich_165      14      12       7       0       0       0       0
## Saanich_200       0       0       2       0       0       0       0
##             Otu0925 Otu0926 Otu0927 Otu0928 Otu0929 Otu0930 Otu0931
## Saanich_010       0       0       0       0      16       0       0
## Saanich_100       2       2       2      11       0       0       0
## Saanich_120       4       6       6       5       0       2       0
## Saanich_135       6       8       6       0       0       6       0
## Saanich_150       4       0       2       0       0       2       2
## Saanich_165       0       0       0       0       0       6      14
## Saanich_200       0       0       0       0       0       0       0
##             Otu0932 Otu0933 Otu0934 Otu0935 Otu0936 Otu0937 Otu0938
## Saanich_010       0       0       0       0       6       0       0
## Saanich_100      14       0       2       0       5       0       0
## Saanich_120       2       4       0       0       2       0       0
## Saanich_135       0       6       3       0       2       0       0
## Saanich_150       0       2       0       0       0       0       0
## Saanich_165       0       4       8       0       0       0       0
## Saanich_200       0       0       2      15       0      15      15
##             Otu0939 Otu0940 Otu0941 Otu0942 Otu0943 Otu0944 Otu0945
## Saanich_010      15      15       0       0       0       0       0
## Saanich_100       0       0       0       7       2       0       7
## Saanich_120       0       0       2       4       2       0       2
## Saanich_135       0       0       0       4       0       0       2
## Saanich_150       0       0       9       0       0       0       4
## Saanich_165       0       0       4       0       0       0       0
## Saanich_200       0       0       0       0      11      15       0
##             Otu0946 Otu0947 Otu0948 Otu0949 Otu0950 Otu0951 Otu0952
## Saanich_010       0       0       0       0       6      15      15
## Saanich_100       4      13      10       4       4       0       0
## Saanich_120       5       2       5       7       3       0       0
## Saanich_135       4       0       0       4       2       0       0
## Saanich_150       2       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu0953 Otu0954 Otu0955 Otu0956 Otu0957 Otu0958 Otu0959
## Saanich_010      13       0       0       0       0      15       0
## Saanich_100       2       0       2      10      11       0       0
## Saanich_120       0       2       4       3       0       0       0
## Saanich_135       0       7       7       2       4       0       8
## Saanich_150       0       6       2       0       0       0       0
## Saanich_165       0       0       0       0       0       0       7
## Saanich_200       0       0       0       0       0       0       0
##             Otu0960 Otu0961 Otu0962 Otu0963 Otu0964 Otu0965 Otu0966
## Saanich_010       0       2       0      15       0       0       0
## Saanich_100       0       0       9       0       7       0       0
## Saanich_120       0       7       0       0       8       0       2
## Saanich_135       0       1       4       0       0       1       2
## Saanich_150       0       3       2       0       0       2       7
## Saanich_165      13       0       0       0       0      12       4
## Saanich_200       2       2       0       0       0       0       0
##             Otu0967 Otu0968 Otu0969 Otu0970 Otu0971 Otu0972 Otu0973
## Saanich_010       0       0      15       0      15       0       0
## Saanich_100       8       7       0       3       0       0       0
## Saanich_120       7       6       0       4       0       0       0
## Saanich_135       0       2       0       4       0       2       0
## Saanich_150       0       0       0       2       0       7       4
## Saanich_165       0       0       0       0       0       6      11
## Saanich_200       0       0       0       2       0       0       0
##             Otu0974 Otu0975 Otu0976 Otu0977 Otu0978 Otu0979 Otu0980
## Saanich_010       0       0       8      14       0      14       0
## Saanich_100       6       4       2       0       0       0       0
## Saanich_120       9       9       4       0       0       0       4
## Saanich_135       0       2       0       0       0       0       2
## Saanich_150       0       0       0       0       0       0       4
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0      14       0       4
##             Otu0981 Otu0982 Otu0983 Otu0984 Otu0985 Otu0986 Otu0987
## Saanich_010       2      12      14      14      14       0       0
## Saanich_100       4       0       0       0       0       0       6
## Saanich_120       4       0       0       0       0       0       8
## Saanich_135       2       1       0       0       0       2       0
## Saanich_150       2       1       0       0       0      12       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu0988 Otu0989 Otu0990 Otu0991 Otu0992 Otu0993 Otu0994
## Saanich_010       2       0       0       0       0       0       4
## Saanich_100      12      14       4       2       0       0       8
## Saanich_120       0       0       6       6       0       0       2
## Saanich_135       0       0       2       2       2       0       0
## Saanich_150       0       0       2       2       4       0       0
## Saanich_165       0       0       0       2       8      14       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu0995 Otu0996 Otu0997 Otu0998 Otu0999 Otu1000 Otu1001
## Saanich_010      14       0       0       6      14       0      14
## Saanich_100       0       0       6       0       0       0       0
## Saanich_120       0       0       4       0       0       0       0
## Saanich_135       0       0       4       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       0      12       0       8       0      14       0
##             Otu1002 Otu1003 Otu1004 Otu1005 Otu1006 Otu1007 Otu1008
## Saanich_010      14       0      12      10      12       0       0
## Saanich_100       0      10       0       0       2       2      10
## Saanich_120       0       4       2       2       0       2       4
## Saanich_135       0       0       0       2       0       3       0
## Saanich_150       0       0       0       0       0       7       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1009 Otu1010 Otu1011 Otu1012 Otu1013 Otu1014 Otu1015
## Saanich_010       0      10      14      14      14      14       0
## Saanich_100       8       0       0       0       0       0       0
## Saanich_120       6       2       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       2       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       4
## Saanich_200       0       0       0       0       0       0      10
##             Otu1016 Otu1017 Otu1018 Otu1019 Otu1020 Otu1021 Otu1022
## Saanich_010      10       0       0       0       0       0       0
## Saanich_100       0       0       2       0       6      11       6
## Saanich_120       0       0      10       0       6       0       8
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       2       0       0       0       0
## Saanich_200       4      14       0      14       0       3       0
##             Otu1023 Otu1024 Otu1025 Otu1026 Otu1027 Otu1028 Otu1029
## Saanich_010       0       0       0       0       0       0       2
## Saanich_100       2       2       7       7       9       0       9
## Saanich_120       7       4       2       6       0       0       2
## Saanich_135       2       0       2       0       2       0       0
## Saanich_150       3       2       0       0       2       0       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       0       4       2       0       0      13       0
##             Otu1030 Otu1031 Otu1032 Otu1033 Otu1034 Otu1035 Otu1036
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       9       0       0       0       2       0       2
## Saanich_120       2       0       0       0       5       0       0
## Saanich_135       2       0       0       0       2       2       5
## Saanich_150       0       4       0       0       2       0       2
## Saanich_165       0       9       0       0       2      11       4
## Saanich_200       0       0      13      13       0       0       0
##             Otu1037 Otu1038 Otu1039 Otu1040 Otu1041 Otu1042 Otu1043
## Saanich_010       0       0      13      13       0      13      13
## Saanich_100       0       4       0       0       4       0       0
## Saanich_120       0       7       0       0       5       0       0
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165      13       0       0       0       0       0       0
## Saanich_200       0       0       0       0       4       0       0
##             Otu1044 Otu1045 Otu1046 Otu1047 Otu1048 Otu1049 Otu1050
## Saanich_010      13      13       0       2       0      13       0
## Saanich_100       0       0       0       7       0       0       0
## Saanich_120       0       0       9       0       0       0       3
## Saanich_135       0       0       2       0       0       0       2
## Saanich_150       0       0       0       0       0       0       6
## Saanich_165       0       0       2       2       0       0       2
## Saanich_200       0       0       0       2      13       0       0
##             Otu1051 Otu1052 Otu1053 Otu1054 Otu1055 Otu1056 Otu1057
## Saanich_010       0       0       0       6       0      11       0
## Saanich_100      11       0       0       2       0       0       7
## Saanich_120       2       0       0       3       0       0       4
## Saanich_135       0       0       0       2       0       2       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       3       0       0       0       0
## Saanich_200       0      13      10       0      13       0       0
##             Otu1058 Otu1059 Otu1060 Otu1061 Otu1062 Otu1063 Otu1064
## Saanich_010      11       0       2       0       0       0       0
## Saanich_100       2       0       0       0       9       0       5
## Saanich_120       0       7       0       0       2       0       8
## Saanich_135       0       4       0       6       0       0       0
## Saanich_150       0       2       0       7       0       0       0
## Saanich_165       0       0       0       0       0      13       0
## Saanich_200       0       0      11       0       2       0       0
##             Otu1065 Otu1066 Otu1067 Otu1068 Otu1069 Otu1070 Otu1071
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       5       6       7       0
## Saanich_120       2       0       0       6       7       4       0
## Saanich_135       0       0       0       2       0       0       0
## Saanich_150       0       2       0       0       0       2       0
## Saanich_165       4       2      13       0       0       0       0
## Saanich_200       7       9       0       0       0       0      12
##             Otu1072 Otu1073 Otu1074 Otu1075 Otu1076 Otu1077 Otu1078
## Saanich_010       4       0       6       0       8      12      10
## Saanich_100       2       0       0       0       2       0       0
## Saanich_120       0       0       0      10       2       0       2
## Saanich_135       4       0       4       2       0       0       0
## Saanich_150       2       0       2       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0      12       0       0       0       0       0
##             Otu1079 Otu1080 Otu1081 Otu1082 Otu1083 Otu1084 Otu1085
## Saanich_010       0      10       0       9       0       0      12
## Saanich_100       4       2       2       0       7       7       0
## Saanich_120       2       0       0       0       0       5       0
## Saanich_135       0       0       4       0       5       0       0
## Saanich_150       0       0       3       3       0       0       0
## Saanich_165       6       0       3       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1086 Otu1087 Otu1088 Otu1089 Otu1090 Otu1091 Otu1092
## Saanich_010       0      10       2       0      12      12       0
## Saanich_100       0       2       2       8       0       0       0
## Saanich_120      12       0       8       4       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0      12
##             Otu1093 Otu1094 Otu1095 Otu1096 Otu1097 Otu1098 Otu1099
## Saanich_010       0      12       0      12       0      12      12
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       2       0      12       0       0       0       0
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       2       0       0       0       0       0       0
## Saanich_165       4       0       0       0       8       0       0
## Saanich_200       0       0       0       0       4       0       0
##             Otu1100 Otu1101 Otu1102 Otu1103 Otu1104 Otu1105 Otu1106
## Saanich_010       2       4       0       0      12      12       0
## Saanich_100       6       4       6       9       0       0       8
## Saanich_120       4       0       2       0       0       0       2
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       4       0       0       0       0
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       2       0       3       0       0       0
##             Otu1107 Otu1108 Otu1109 Otu1110 Otu1111 Otu1112 Otu1113
## Saanich_010       0       0      12       0       0       0       8
## Saanich_100       2       0       0       0       0      12       4
## Saanich_120       8       0       0       0       4       0       0
## Saanich_135       2       0       0       0       2       0       0
## Saanich_150       0       0       0       2       6       0       0
## Saanich_165       0       2       0       2       0       0       0
## Saanich_200       0      10       0       8       0       0       0
##             Otu1114 Otu1115 Otu1116 Otu1117 Otu1118 Otu1119 Otu1120
## Saanich_010      10       0       0       0       0       0       0
## Saanich_100       2       0       0       0       0       0       2
## Saanich_120       0       0       0       0       0       6       4
## Saanich_135       0       0       0       0       3       0       0
## Saanich_150       0       0       0       0       0       2       6
## Saanich_165       0      12      12       0       0       4       0
## Saanich_200       0       0       0      12       9       0       0
##             Otu1121 Otu1122 Otu1123 Otu1124 Otu1125 Otu1126 Otu1127
## Saanich_010      12       0       0       0       0       0       0
## Saanich_100       0       0       0       2       4       2       2
## Saanich_120       0       0       2       6       6       8       4
## Saanich_135       0       2       0       0       2       2       4
## Saanich_150       0       6       0       0       0       0       0
## Saanich_165       0       4      10       4       0       0       2
## Saanich_200       0       0       0       0       0       0       0
##             Otu1128 Otu1129 Otu1130 Otu1131 Otu1132 Otu1133 Otu1134
## Saanich_010       0      12       0       0       0       0       0
## Saanich_100       0       0       0      11       0       0       0
## Saanich_120       0       0       3       0       0       0       4
## Saanich_135       0       0       0       0       0       0       2
## Saanich_150       0       0       0       0       2       0       5
## Saanich_165       2       0       9       0       4      11       0
## Saanich_200      10       0       0       0       5       0       0
##             Otu1135 Otu1136 Otu1137 Otu1138 Otu1139 Otu1140 Otu1141
## Saanich_010       0       0       0       0      11       3       0
## Saanich_100       5       0       9      11       0       4       6
## Saanich_120       6       0       2       0       0       0       5
## Saanich_135       0       0       0       0       0       2       0
## Saanich_150       0       0       0       0       0       2       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0      11       0       0       0       0       0
##             Otu1142 Otu1143 Otu1144 Otu1145 Otu1146 Otu1147 Otu1148
## Saanich_010      11       0       9       9       0       0       0
## Saanich_100       0       0       0       0       4       0      11
## Saanich_120       0       7       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       2       0       0       4       0
## Saanich_165       0       4       0       2       0       2       0
## Saanich_200       0       0       0       0       7       5       0
##             Otu1149 Otu1150 Otu1151 Otu1152 Otu1153 Otu1154 Otu1155
## Saanich_010       0       0       0      11      11       9       0
## Saanich_100      11       0       7       0       0       2       4
## Saanich_120       0       0       4       0       0       0       7
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       0       9       0       0       0       0       0
##             Otu1156 Otu1157 Otu1158 Otu1159 Otu1160 Otu1161 Otu1162
## Saanich_010       0      11       0       0       0       0       0
## Saanich_100       6       0       7       0       5       3       0
## Saanich_120       5       0       4       0       2       6       0
## Saanich_135       0       0       0       0       0       2       2
## Saanich_150       0       0       0       0       0       0       5
## Saanich_165       0       0       0      11       4       0       2
## Saanich_200       0       0       0       0       0       0       2
##             Otu1163 Otu1164 Otu1165 Otu1166 Otu1167 Otu1168 Otu1169
## Saanich_010       0       0       0       0      11       0       0
## Saanich_100       0       9       0       7       0       0       0
## Saanich_120       0       2       0       4       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       7
## Saanich_165       0       0      11       0       0       9       0
## Saanich_200      11       0       0       0       0       2       2
##             Otu1170 Otu1171 Otu1172 Otu1173 Otu1174 Otu1175 Otu1176
## Saanich_010      11       0       0      11       0       0       0
## Saanich_100       0       0       0       0       0       0      11
## Saanich_120       0       0       0       0       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       9       0
## Saanich_165       0       0       2       0       4       0       0
## Saanich_200       0      11       9       0       7       0       0
##             Otu1177 Otu1178 Otu1179 Otu1180 Otu1181 Otu1182 Otu1183
## Saanich_010       0       0      11       0       0       0       0
## Saanich_100       0       0       0      11       9       0       9
## Saanich_120       0       0       0       0       2       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200      11      11       0       0       0      11       0
##             Otu1184 Otu1185 Otu1186 Otu1187 Otu1188 Otu1189 Otu1190
## Saanich_010       0       0       0       4       0       2       5
## Saanich_100       8       4       5       5       0       9       0
## Saanich_120       3       7       6       2       4       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       7       0       6
##             Otu1191 Otu1192 Otu1193 Otu1194 Otu1195 Otu1196 Otu1197
## Saanich_010       0       6       0       0       0       0       4
## Saanich_100       2       4       8       2       8       0       2
## Saanich_120       2       0       0       2       2       0       2
## Saanich_135       2       0       2       0       0       0       2
## Saanich_150       2       0       0       2       0       0       0
## Saanich_165       3       0       0       4       0       0       0
## Saanich_200       0       0       0       0       0      10       0
##             Otu1198 Otu1199 Otu1200 Otu1201 Otu1202 Otu1203 Otu1204
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       8       2       4       0
## Saanich_120       0       0       0       2       4       4       0
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       0       0       0       0       2       0       0
## Saanich_165       6       0       4       0       0       2       0
## Saanich_200       4      10       6       0       0       0      10
##             Otu1205 Otu1206 Otu1207 Otu1208 Otu1209 Otu1210 Otu1211
## Saanich_010       6       0       7       0       0       0       0
## Saanich_100       2       2       3       0       0       0       1
## Saanich_120       0       2       0       2       0       1       1
## Saanich_135       0       2       0       0       0       0       2
## Saanich_150       0       4       0       4       0       4       6
## Saanich_165       0       0       0       4       8       1       0
## Saanich_200       2       0       0       0       2       4       0
##             Otu1212 Otu1213 Otu1214 Otu1215 Otu1216 Otu1217 Otu1218
## Saanich_010       0      10       0       0       0      10       6
## Saanich_100       4       0       0       0       0       0       0
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       2       0       0       0       0       0       2
## Saanich_150       2       0       0       0       6       0       2
## Saanich_165       0       0       4       8       2       0       0
## Saanich_200       0       0       6       2       2       0       0
##             Otu1219 Otu1220 Otu1221 Otu1222 Otu1223 Otu1224 Otu1225
## Saanich_010       0      10       2       0      10       0       4
## Saanich_100       0       0       4      10       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       2       0       0       8       2
## Saanich_150       0       0       2       0       0       2       0
## Saanich_165       4       0       0       0       0       0       0
## Saanich_200       6       0       0       0       0       0       4
##             Otu1226 Otu1227 Otu1228 Otu1229 Otu1230 Otu1231 Otu1232
## Saanich_010      10       8       6       0       0       0       0
## Saanich_100       0       0       2       2       0       0       0
## Saanich_120       0       0       0       4       4       2       6
## Saanich_135       0       2       2       0       4       4       0
## Saanich_150       0       0       0       4       2       4       2
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       0       0       0       0       0       0
##             Otu1233 Otu1234 Otu1235 Otu1236 Otu1237 Otu1238 Otu1239
## Saanich_010       0       0      10       0       8       2       0
## Saanich_100       0       6       0       0       0       6       0
## Saanich_120       0       4       0       0       0       2       7
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       6       0       0       0       0       0       3
## Saanich_165       0       0       0       2       0       0       0
## Saanich_200       2       0       0       8       2       0       0
##             Otu1240 Otu1241 Otu1242 Otu1243 Otu1244 Otu1245 Otu1246
## Saanich_010       0       0       0       6       0       0       0
## Saanich_100       0       0       0       4       6       0       0
## Saanich_120       0       0       0       0       4       0       0
## Saanich_135       0       2       4       0       0       2       0
## Saanich_150       2       2       6       0       0       0       2
## Saanich_165       6       6       0       0       0       4       0
## Saanich_200       2       0       0       0       0       4       8
##             Otu1247 Otu1248 Otu1249 Otu1250 Otu1251 Otu1252 Otu1253
## Saanich_010       0       8       0       0       0       0       2
## Saanich_100       0       0       0       0       4      10       0
## Saanich_120       0       0       0       0       0       0       4
## Saanich_135       0       0       0       0       6       0       0
## Saanich_150       0       0       8       0       0       0       0
## Saanich_165       0       0       2       0       0       0       4
## Saanich_200      10       2       0      10       0       0       0
##             Otu1254 Otu1255 Otu1256 Otu1257 Otu1258 Otu1259 Otu1260
## Saanich_010       0       0       0       0       0       8       1
## Saanich_100       8       0       6       0       4       0       2
## Saanich_120       0       0       0       4       2       0       0
## Saanich_135       2       0       2       6       4       0       4
## Saanich_150       0       0       2       0       0       0       0
## Saanich_165       0       0       0       0       0       0       1
## Saanich_200       0      10       0       0       0       2       2
##             Otu1261 Otu1262 Otu1263 Otu1264 Otu1265 Otu1266 Otu1267
## Saanich_010       0       0       0       2       0       0       0
## Saanich_100       2       6       2       3       6       4       8
## Saanich_120       4       2       4       5       4       2       2
## Saanich_135       2       2       0       0       0       0       0
## Saanich_150       2       0       2       0       0       0       0
## Saanich_165       0       0       2       0       0       2       0
## Saanich_200       0       0       0       0       0       2       0
##             Otu1268 Otu1269 Otu1270 Otu1271 Otu1272 Otu1273 Otu1274
## Saanich_010       0       0       0       0       0       7       0
## Saanich_100       2       4       2       0      10       0       0
## Saanich_120       0       4       0      10       0       2       0
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       5
## Saanich_165       8       0       0       0       0       0       4
## Saanich_200       0       0       8       0       0       0       0
##             Otu1275 Otu1276 Otu1277 Otu1278 Otu1279 Otu1280 Otu1281
## Saanich_010       9       7       0       0       2       0       0
## Saanich_100       0       2       0       0       5       2       3
## Saanich_120       0       0       3       0       2       3       4
## Saanich_135       0       0       0       0       0       0       2
## Saanich_150       0       0       0       0       0       2       0
## Saanich_165       0       0       6       9       0       2       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1282 Otu1283 Otu1284 Otu1285 Otu1286 Otu1287 Otu1288
## Saanich_010       9       0       0       7       0       9       0
## Saanich_100       0       0       0       2       9       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       3       0       0       0       0       0
## Saanich_150       0       2       0       0       0       0       0
## Saanich_165       0       4       0       0       0       0       5
## Saanich_200       0       0       9       0       0       0       4
##             Otu1289 Otu1290 Otu1291 Otu1292 Otu1293 Otu1294 Otu1295
## Saanich_010       9       0       0       0       9       0       0
## Saanich_100       0       4       0       0       0       0       2
## Saanich_120       0       2       0       3       0       2       5
## Saanich_135       0       3       9       4       0       2       0
## Saanich_150       0       0       0       2       0       5       2
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1296 Otu1297 Otu1298 Otu1299 Otu1300 Otu1301 Otu1302
## Saanich_010       0       9       0       0       0       0       0
## Saanich_100       9       0       2       6       7       7       7
## Saanich_120       0       0       3       3       0       0       2
## Saanich_135       0       0       4       0       0       2       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       2       0       0
##             Otu1303 Otu1304 Otu1305 Otu1306 Otu1307 Otu1308 Otu1309
## Saanich_010       0       9       7       9       0       0       0
## Saanich_100       9       0       0       0       2       2       9
## Saanich_120       0       0       2       0       5       5       0
## Saanich_135       0       0       0       0       2       2       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1310 Otu1311 Otu1312 Otu1313 Otu1314 Otu1315 Otu1316
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       5       0       2       0       0       0       7
## Saanich_120       2       0       5       0       0       0       0
## Saanich_135       2       0       0       4       0       0       2
## Saanich_150       0       0       2       5       0       0       0
## Saanich_165       0       2       0       0       5       0       0
## Saanich_200       0       7       0       0       4       9       0
##             Otu1317 Otu1318 Otu1319 Otu1320 Otu1321 Otu1322 Otu1323
## Saanich_010       0       0       0       0       9       0       0
## Saanich_100       5       2       0       0       0       0       0
## Saanich_120       4       5       0       0       0       9       9
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       2       9       0       0       0       0
## Saanich_200       0       0       0       9       0       0       0
##             Otu1324 Otu1325 Otu1326 Otu1327 Otu1328 Otu1329 Otu1330
## Saanich_010       0       0       0       4       0       0       0
## Saanich_100       0       0       0       5       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       2       0       0
## Saanich_165       0       0       0       0       7       7       6
## Saanich_200       9       9       9       0       0       2       3
##             Otu1331 Otu1332 Otu1333 Otu1334 Otu1335 Otu1336 Otu1337
## Saanich_010       0       0       0       0       0       0       7
## Saanich_100       5       6       7       3       0       0       0
## Saanich_120       2       0       2       6       0       2       0
## Saanich_135       0       0       0       0       5       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       2       7       0
## Saanich_200       2       3       0       0       2       0       2
##             Otu1338 Otu1339 Otu1340 Otu1341 Otu1342 Otu1343 Otu1344
## Saanich_010       0       5       0       2       0       0       0
## Saanich_100       4       4       9       7       0       0       2
## Saanich_120       2       0       0       0       0       2       4
## Saanich_135       0       0       0       0       0       4       0
## Saanich_150       3       0       0       0       0       3       3
## Saanich_165       0       0       0       0       7       0       0
## Saanich_200       0       0       0       0       2       0       0
##             Otu1345 Otu1346 Otu1347 Otu1348 Otu1349 Otu1350 Otu1351
## Saanich_010       0       0       8       0       8       0       0
## Saanich_100       6       4       0       4       0       0       0
## Saanich_120       0       4       0       4       0       0       0
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       8       8
## Saanich_200       0       0       0       0       0       0       0
##             Otu1352 Otu1353 Otu1354 Otu1355 Otu1356 Otu1357 Otu1358
## Saanich_010       0       0       0       0       4       0       0
## Saanich_100       0       6       0       2       0       0       6
## Saanich_120       0       2       0       0       0       0       2
## Saanich_135       0       0       4       2       0       0       0
## Saanich_150       2       0       0       0       2       0       0
## Saanich_165       6       0       4       4       0       0       0
## Saanich_200       0       0       0       0       2       8       0
##             Otu1359 Otu1360 Otu1361 Otu1362 Otu1363 Otu1364 Otu1365
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       8       6       8       0       2       0
## Saanich_120       0       0       0       0       0       5       0
## Saanich_135       0       0       2       0       0       1       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       8       0       0       0       8       0       6
##             Otu1366 Otu1367 Otu1368 Otu1369 Otu1370 Otu1371 Otu1372
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       2       8       0       0
## Saanich_120       0       0       0       6       0       6       2
## Saanich_135       0       0       0       0       0       2       6
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       2       0       0       0       0
## Saanich_200       8       8       6       0       0       0       0
##             Otu1373 Otu1374 Otu1375 Otu1376 Otu1377 Otu1378 Otu1379
## Saanich_010       2       0       0       0       0       0       0
## Saanich_100       4       0       0       6       0       0       0
## Saanich_120       2       0       8       2       0       0       2
## Saanich_135       0       2       0       0       0       4       0
## Saanich_150       0       4       0       0       4       0       2
## Saanich_165       0       2       0       0       4       4       4
## Saanich_200       0       0       0       0       0       0       0
##             Otu1380 Otu1381 Otu1382 Otu1383 Otu1384 Otu1385 Otu1386
## Saanich_010       0       4       0       8       0       2       8
## Saanich_100       0       2       2       0       8       4       0
## Saanich_120       0       0       2       0       0       0       0
## Saanich_135       0       0       4       0       0       2       0
## Saanich_150       0       2       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       8       0       0       0       0       0       0
##             Otu1387 Otu1388 Otu1389 Otu1390 Otu1391 Otu1392 Otu1393
## Saanich_010       8       8       4       0       8       4       0
## Saanich_100       0       0       2       0       0       2       4
## Saanich_120       0       0       2       4       0       0       2
## Saanich_135       0       0       0       4       0       2       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       0       0       0       0       0       0
##             Otu1394 Otu1395 Otu1396 Otu1397 Otu1398 Otu1399 Otu1400
## Saanich_010       0       0       0       0       0       0       4
## Saanich_100       0       3       4       4       0       0       4
## Saanich_120       2       5       4       4       0       2       0
## Saanich_135       0       0       0       0       0       4       0
## Saanich_150       2       0       0       0       2       0       0
## Saanich_165       0       0       0       0       6       2       0
## Saanich_200       4       0       0       0       0       0       0
##             Otu1401 Otu1402 Otu1403 Otu1404 Otu1405 Otu1406 Otu1407
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       6       4       0       4
## Saanich_120       0       4       2       0       2       0       4
## Saanich_135       0       0       2       2       2       2       0
## Saanich_150       0       0       2       0       0       4       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       8       0       0       0       0       2       0
##             Otu1408 Otu1409 Otu1410 Otu1411 Otu1412 Otu1413 Otu1414
## Saanich_010       0       6       0       8       0       0       6
## Saanich_100       2       2       4       0       0       0       0
## Saanich_120       4       0       4       0       0       0       0
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       6       4       0
## Saanich_200       0       0       0       0       2       4       2
##             Otu1415 Otu1416 Otu1417 Otu1418 Otu1419 Otu1420 Otu1421
## Saanich_010       0       0       4       8       0       0       0
## Saanich_100       0       2       0       0       0       6       0
## Saanich_120       0       2       0       0       0       2       2
## Saanich_135       0       0       0       0       0       0       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       4
## Saanich_200       8       4       4       0       8       0       0
##             Otu1422 Otu1423 Otu1424 Otu1425 Otu1426 Otu1427 Otu1428
## Saanich_010       0       0       0       0       8       0       0
## Saanich_100       2       0       2       0       0       2       8
## Saanich_120       6       4       6       0       0       2       0
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       2       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       8       0       4       0
##             Otu1429 Otu1430 Otu1431 Otu1432 Otu1433 Otu1434 Otu1435
## Saanich_010       0       0       0       0       4       0       0
## Saanich_100       0       4       4       0       4       4       0
## Saanich_120       0       4       4       2       0       4       0
## Saanich_135       4       0       0       4       0       0       0
## Saanich_150       4       0       0       2       0       0       0
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       0       0       0       0       0       6
##             Otu1436 Otu1437 Otu1438 Otu1439 Otu1440 Otu1441 Otu1442
## Saanich_010       0       0       8       0       0       0       0
## Saanich_100       0       4       0       2       0       0       8
## Saanich_120       0       0       0       4       0       0       0
## Saanich_135       0       2       0       2       0       0       0
## Saanich_150       0       2       0       0       0       0       0
## Saanich_165       8       0       0       0       8       2       0
## Saanich_200       0       0       0       0       0       6       0
##             Otu1443 Otu1444 Otu1445 Otu1446 Otu1447 Otu1448 Otu1449
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       2       6       4       4
## Saanich_120       2       0       0       0       2       0       4
## Saanich_135       0       0       0       2       0       4       0
## Saanich_150       0       0       2       4       0       0       0
## Saanich_165       6       0       4       0       0       0       0
## Saanich_200       0       8       2       0       0       0       0
##             Otu1450 Otu1451 Otu1452 Otu1453 Otu1454 Otu1455 Otu1456
## Saanich_010       8       0       0       0       2       2       0
## Saanich_100       0       0       2       0       2       2       0
## Saanich_120       0       2       4       0       0       2       0
## Saanich_135       0       2       2       0       4       2       0
## Saanich_150       0       0       0       8       0       0       0
## Saanich_165       0       4       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       8
##             Otu1457 Otu1458 Otu1459 Otu1460 Otu1461 Otu1462 Otu1463
## Saanich_010       0       2       0       8       0       0       0
## Saanich_100       2       2       0       0       0       0       0
## Saanich_120       4       4       0       0       0       0       8
## Saanich_135       2       0       2       0       0       0       0
## Saanich_150       0       0       0       0       0       4       0
## Saanich_165       0       0       6       0       8       0       0
## Saanich_200       0       0       0       0       0       4       0
##             Otu1464 Otu1465 Otu1466 Otu1467 Otu1468 Otu1469 Otu1470
## Saanich_010       0       0       2       8       6       0       0
## Saanich_100       0       4       4       0       2       0       0
## Saanich_120       0       0       0       0       0       2       0
## Saanich_135       0       4       2       0       0       0       0
## Saanich_150       2       0       0       0       0       2       0
## Saanich_165       2       0       0       0       0       4       8
## Saanich_200       4       0       0       0       0       0       0
##             Otu1471 Otu1472 Otu1473 Otu1474 Otu1475 Otu1476 Otu1477
## Saanich_010       0       8       0       0       0       0       0
## Saanich_100       2       0       8       6       0       0       8
## Saanich_120       2       0       0       2       2       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       4       0       0       0       4       0       0
## Saanich_165       0       0       0       0       0       8       0
## Saanich_200       0       0       0       0       2       0       0
##             Otu1478 Otu1479 Otu1480 Otu1481 Otu1482 Otu1483 Otu1484
## Saanich_010       0       6       0       6       8       8       0
## Saanich_100       0       0       4       2       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       2       4       0       0       0       0
## Saanich_150       2       0       0       0       0       0       0
## Saanich_165       6       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       8
##             Otu1485 Otu1486 Otu1487 Otu1488 Otu1489 Otu1490 Otu1491
## Saanich_010       0       0       0       7       2       0       0
## Saanich_100       7       7       2       0       3       0       4
## Saanich_120       0       0       5       0       0       3       3
## Saanich_135       0       0       0       0       2       4       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1492 Otu1493 Otu1494 Otu1495 Otu1496 Otu1497 Otu1498
## Saanich_010       7       0       7       0       0       0       0
## Saanich_100       0       0       0       0       7       5       0
## Saanich_120       0       2       0       3       0       2       7
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       5       0       4       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1499 Otu1500 Otu1501 Otu1502 Otu1503 Otu1504 Otu1505
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       3       0       0       0       5       0       3
## Saanich_120       2       5       0       2       0       0       0
## Saanich_135       0       2       0       5       2       0       0
## Saanich_150       0       0       3       0       0       0       0
## Saanich_165       0       0       4       0       0       7       0
## Saanich_200       2       0       0       0       0       0       4
##             Otu1506 Otu1507 Otu1508 Otu1509 Otu1510 Otu1511 Otu1512
## Saanich_010       0       0       0       5       0       0       0
## Saanich_100       0       4       5       0       0       0       2
## Saanich_120       2       3       2       0       0       7       5
## Saanich_135       0       0       0       2       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       5       0       0       0       7       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1513 Otu1514 Otu1515 Otu1516 Otu1517 Otu1518 Otu1519
## Saanich_010       0       2       2       7       7       0       2
## Saanich_100       0       5       5       0       0       0       5
## Saanich_120       0       0       0       0       0       4       0
## Saanich_135       0       0       0       0       0       3       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       7       0       0       0       0       0       0
##             Otu1520 Otu1521 Otu1522 Otu1523 Otu1524 Otu1525 Otu1526
## Saanich_010       2       0       0       0       7       0       0
## Saanich_100       0       2       0       0       0       0       0
## Saanich_120       2       5       5       0       0       2       5
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       3       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       0       2       7       0       5       0
##             Otu1527 Otu1528 Otu1529 Otu1530 Otu1531 Otu1532 Otu1533
## Saanich_010       2       0       7       0       0       5       3
## Saanich_100       0       7       0       0       7       2       2
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       3       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       0       0       7       0       0       0
##             Otu1534 Otu1535 Otu1536 Otu1537 Otu1538 Otu1539 Otu1540
## Saanich_010       0       0       7       7       0       0       7
## Saanich_100       7       0       0       0       7       7       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       5       0       0       0       0       0
## Saanich_200       0       2       0       0       0       0       0
##             Otu1541 Otu1542 Otu1543 Otu1544 Otu1545 Otu1546 Otu1547
## Saanich_010       5       0       0       7       7       0       0
## Saanich_100       2       7       2       0       0       3       0
## Saanich_120       0       0       2       0       0       4       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       3
## Saanich_165       0       0       3       0       0       0       4
## Saanich_200       0       0       0       0       0       0       0
##             Otu1548 Otu1549 Otu1550 Otu1551 Otu1552 Otu1553 Otu1554
## Saanich_010       7       7       0       7       7       0       0
## Saanich_100       0       0       5       0       0       0       5
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       2       0       0       7       0
##             Otu1555 Otu1556 Otu1557 Otu1558 Otu1559 Otu1560 Otu1561
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       6       0       0       0       0       4
## Saanich_120       0       0       6       0       0       6       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       2       0       0       0
## Saanich_200       4       0       0       4       6       0       0
##             Otu1562 Otu1563 Otu1564 Otu1565 Otu1566 Otu1567 Otu1568
## Saanich_010       0       6       4       0       0       4       0
## Saanich_100       0       0       0       0       4       0       4
## Saanich_120       2       0       0       0       2       2       0
## Saanich_135       2       0       0       0       0       0       2
## Saanich_150       2       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       2       6       0       0       0
##             Otu1569 Otu1570 Otu1571 Otu1572 Otu1573 Otu1574 Otu1575
## Saanich_010       0       0       0       6       0       0       0
## Saanich_100       0       0       0       0       0       0       6
## Saanich_120       0       0       0       0       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       6       0       2       0       0       0       0
## Saanich_200       0       6       4       0       6       4       0
##             Otu1576 Otu1577 Otu1578 Otu1579 Otu1580 Otu1581 Otu1582
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       4       0       0       0
## Saanich_120       0       2       2       2       4       0       2
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       2       0       0       2       0
## Saanich_165       4       0       0       0       0       0       4
## Saanich_200       2       0       0       0       2       4       0
##             Otu1583 Otu1584 Otu1585 Otu1586 Otu1587 Otu1588 Otu1589
## Saanich_010       0       0       0       4       0       2       4
## Saanich_100       0       0       6       2       0       2       0
## Saanich_120       0       0       0       0       6       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       6       0       0       0       0       0
## Saanich_200       6       0       0       0       0       0       0
##             Otu1590 Otu1591 Otu1592 Otu1593 Otu1594 Otu1595 Otu1596
## Saanich_010       0       0       0       0       2       0       0
## Saanich_100       0       0       0       6       4       0       0
## Saanich_120       0       0       0       0       0       3       6
## Saanich_135       0       0       6       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       6       0       0       0       3       0
## Saanich_200       6       0       0       0       0       0       0
##             Otu1597 Otu1598 Otu1599 Otu1600 Otu1601 Otu1602 Otu1603
## Saanich_010       0       6       6       6       0       0       0
## Saanich_100       4       0       0       0       0       2       0
## Saanich_120       2       0       0       0       0       0       6
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       4       0
## Saanich_200       0       0       0       0       6       0       0
##             Otu1604 Otu1605 Otu1606 Otu1607 Otu1608 Otu1609 Otu1610
## Saanich_010       0       4       4       6       6       0       6
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       2       0       2       0       0       0       0
## Saanich_150       0       0       0       0       0       4       0
## Saanich_165       4       2       0       0       0       2       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1611 Otu1612 Otu1613 Otu1614 Otu1615 Otu1616 Otu1617
## Saanich_010       2       6       4       6       6       6       0
## Saanich_100       0       0       0       0       0       0       4
## Saanich_120       0       0       2       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       4       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1618 Otu1619 Otu1620 Otu1621 Otu1622 Otu1623 Otu1624
## Saanich_010       6       4       2       6       4       0       4
## Saanich_100       0       2       2       0       0       0       0
## Saanich_120       0       0       2       0       0       0       0
## Saanich_135       0       0       0       0       0       0       2
## Saanich_150       0       0       0       0       2       6       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1625 Otu1626 Otu1627 Otu1628 Otu1629 Otu1630 Otu1631
## Saanich_010       0       0       0       0       2       0       0
## Saanich_100       4       0       6       0       4       0       0
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       2       0       2       0       2       0
## Saanich_150       0       4       0       2       0       2       0
## Saanich_165       0       0       0       2       0       2       2
## Saanich_200       0       0       0       0       0       0       4
##             Otu1632 Otu1633 Otu1634 Otu1635 Otu1636 Otu1637 Otu1638
## Saanich_010       0       2       0       0       0       0       0
## Saanich_100       0       0       4       0       0       0       0
## Saanich_120       2       0       2       2       0       0       4
## Saanich_135       2       2       0       2       0       0       2
## Saanich_150       2       2       0       2       0       2       0
## Saanich_165       0       0       0       0       2       0       0
## Saanich_200       0       0       0       0       4       4       0
##             Otu1639 Otu1640 Otu1641 Otu1642 Otu1643 Otu1644 Otu1645
## Saanich_010       6       6       0       0       0       0       0
## Saanich_100       0       0       0       0       6       6       0
## Saanich_120       0       0       4       4       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       2       2       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       6
##             Otu1646 Otu1647 Otu1648 Otu1649 Otu1650 Otu1651 Otu1652
## Saanich_010       0       6       0       0       6       0       0
## Saanich_100       0       0       6       0       0       0       2
## Saanich_120       6       0       0       0       0       6       4
## Saanich_135       0       0       0       2       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       4       0       0       0
##             Otu1653 Otu1654 Otu1655 Otu1656 Otu1657 Otu1658 Otu1659
## Saanich_010       0       0       6       0       2       6       0
## Saanich_100       0       6       0       2       0       0       0
## Saanich_120       0       0       0       2       0       0       0
## Saanich_135       0       0       0       2       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       6
## Saanich_200       6       0       0       0       4       0       0
##             Otu1660 Otu1661 Otu1662 Otu1663 Otu1664 Otu1665 Otu1666
## Saanich_010       6       0       0       0       4       0       0
## Saanich_100       0       2       0       2       0       0       0
## Saanich_120       0       2       2       4       0       6       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       2       4       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       2       0       6
##             Otu1667 Otu1668 Otu1669 Otu1670 Otu1671 Otu1672 Otu1673
## Saanich_010       0       2       2       2       4       0       0
## Saanich_100       0       4       2       0       0       3       6
## Saanich_120       0       0       2       0       0       3       0
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       6       0       0       4       0       0       0
##             Otu1674 Otu1675 Otu1676 Otu1677 Otu1678 Otu1679 Otu1680
## Saanich_010       2       0       0       0       0       0       0
## Saanich_100       0       6       0       0       0       2       4
## Saanich_120       4       0       0       0       4       0       0
## Saanich_135       0       0       0       0       0       4       0
## Saanich_150       0       0       0       0       0       0       2
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       6       6       2       0       0
##             Otu1681 Otu1682 Otu1683 Otu1684 Otu1685 Otu1686 Otu1687
## Saanich_010       0       0       0       0       6       0       2
## Saanich_100       1       0       6       0       0       0       4
## Saanich_120       5       6       0       0       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       4       0
## Saanich_200       0       0       0       6       0       0       0
##             Otu1688 Otu1689 Otu1690 Otu1691 Otu1692 Otu1693 Otu1694
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       4       0       2       2       6       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       2       0       6       2       2       0       0
## Saanich_150       4       0       0       2       0       0       0
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       2       0       0       2       0       4
##             Otu1695 Otu1696 Otu1697 Otu1698 Otu1699 Otu1700 Otu1701
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       6       0       0       0       0       0       0
## Saanich_135       0       0       2       0       0       0       0
## Saanich_150       0       2       2       0       0       0       0
## Saanich_165       0       0       0       0       0       0       6
## Saanich_200       0       4       2       6       6       6       0
##             Otu1702 Otu1703 Otu1704 Otu1705 Otu1706 Otu1707 Otu1708
## Saanich_010       0       0       0       0       6       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       2       2
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       6       6       6       6       0       4       4
##             Otu1709 Otu1710 Otu1711 Otu1712 Otu1713 Otu1714 Otu1715
## Saanich_010       0       0       6       0       0       0       4
## Saanich_100       0       0       0       0       2       4       0
## Saanich_120       0       0       0       0       4       0       0
## Saanich_135       0       6       0       0       0       0       2
## Saanich_150       0       0       0       2       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       6       0       0       4       0       2       0
##             Otu1716 Otu1717 Otu1718 Otu1719 Otu1720 Otu1721 Otu1722
## Saanich_010       0       6       4       4       2       4       4
## Saanich_100       6       0       2       2       4       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1723 Otu1724 Otu1725 Otu1726 Otu1727 Otu1728 Otu1729
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       4       2       2       4       6       2       0
## Saanich_120       2       4       2       0       0       2       6
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       2       2       0       2       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1730 Otu1731 Otu1732 Otu1733 Otu1734 Otu1735 Otu1736
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       0       4       6       2
## Saanich_120       0       0       2       2       2       0       0
## Saanich_135       0       0       4       2       0       0       2
## Saanich_150       0       4       0       0       0       0       2
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       4       0       0       2       0       0       0
##             Otu1737 Otu1738 Otu1739 Otu1740 Otu1741 Otu1742 Otu1743
## Saanich_010       0       0       6       0       0       4       4
## Saanich_100       0       2       0       2       0       0       0
## Saanich_120       2       0       0       2       0       0       0
## Saanich_135       2       0       0       0       0       2       0
## Saanich_150       0       0       0       2       0       0       0
## Saanich_165       2       4       0       0       0       0       0
## Saanich_200       0       0       0       0       6       0       2
##             Otu1744 Otu1745 Otu1746 Otu1747 Otu1748 Otu1749 Otu1750
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       0       0       0       0       0
## Saanich_120       0       2       0       0       0       0       2
## Saanich_135       0       0       2       0       0       0       0
## Saanich_150       0       2       0       0       0       2       2
## Saanich_165       6       0       4       6       2       4       2
## Saanich_200       0       0       0       0       4       0       0
##             Otu1751 Otu1752 Otu1753 Otu1754 Otu1755 Otu1756 Otu1757
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       2       0       0       0       0
## Saanich_120       0       0       4       0       0       0       0
## Saanich_135       0       0       0       0       0       0       4
## Saanich_150       2       2       0       0       0       2       0
## Saanich_165       2       0       0       0       4       2       0
## Saanich_200       0       4       0       6       2       2       2
##             Otu1758 Otu1759 Otu1760 Otu1761 Otu1762 Otu1763 Otu1764
## Saanich_010       0       6       4       6       0       0       0
## Saanich_100       0       0       0       0       0       2       0
## Saanich_120       0       0       2       0       6       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       4       0
## Saanich_200       6       0       0       0       0       0       6
##             Otu1765 Otu1766 Otu1767 Otu1768 Otu1769 Otu1770 Otu1771
## Saanich_010       0       6       0       6       2       4       0
## Saanich_100       2       0       4       0       4       2       4
## Saanich_120       0       0       2       0       0       0       0
## Saanich_135       2       0       0       0       0       0       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       0       0       0       0       0       0
##             Otu1772 Otu1773 Otu1774 Otu1775 Otu1776 Otu1777 Otu1778
## Saanich_010       0       0       6       0       0       0       4
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       4       0       0       0       0       0       2
## Saanich_135       0       0       0       0       6       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       6       0       6       0       6       0
##             Otu1779 Otu1780 Otu1781 Otu1782 Otu1783 Otu1784 Otu1785
## Saanich_010       4       0       0       0       0       0       6
## Saanich_100       0       6       6       4       6       6       0
## Saanich_120       2       0       0       2       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1786 Otu1787 Otu1788 Otu1789 Otu1790 Otu1791 Otu1792
## Saanich_010       6       2       0       0       0       0       0
## Saanich_100       0       0       0       0       6       6       0
## Saanich_120       0       4       2       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       6       0       0       0
## Saanich_165       0       0       4       0       0       0       6
## Saanich_200       0       0       0       0       0       0       0
##             Otu1793 Otu1794 Otu1795 Otu1796 Otu1797 Otu1798 Otu1799
## Saanich_010       0       0       0       0       0       4       6
## Saanich_100       0       0       0       0       4       2       0
## Saanich_120       4       2       4       0       0       0       0
## Saanich_135       2       2       0       0       2       0       0
## Saanich_150       0       2       2       0       0       0       0
## Saanich_165       0       0       0       2       0       0       0
## Saanich_200       0       0       0       4       0       0       0
##             Otu1800 Otu1801 Otu1802 Otu1803 Otu1804 Otu1805 Otu1806
## Saanich_010       0       0       6       4       2       0       0
## Saanich_100       6       0       0       0       2       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       4       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       6
## Saanich_200       0       0       0       2       2       6       0
##             Otu1807 Otu1808 Otu1809 Otu1810 Otu1811 Otu1812 Otu1813
## Saanich_010       0       0       0       3       0       0       0
## Saanich_100       0       0       0       3       0       0       0
## Saanich_120       0       6       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       2       0       0
## Saanich_165       4       0       6       0       2       6       0
## Saanich_200       2       0       0       0       2       0       6
##             Otu1814 Otu1815 Otu1816 Otu1817 Otu1818 Otu1819 Otu1820
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       6       0       6       0       0       2
## Saanich_120       0       0       0       0       2       0       0
## Saanich_135       2       0       4       0       0       0       4
## Saanich_150       0       0       2       0       0       0       0
## Saanich_165       4       0       0       0       4       0       0
## Saanich_200       0       0       0       0       0       6       0
##             Otu1821 Otu1822 Otu1823 Otu1824 Otu1825 Otu1826 Otu1827
## Saanich_010       0       6       6       4       0       6       0
## Saanich_100       2       0       0       2       0       0       0
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       0       0       0       0       0       0
## Saanich_165       0       0       0       0       6       0       0
## Saanich_200       0       0       0       0       0       0       6
##             Otu1828 Otu1829 Otu1830 Otu1831 Otu1832 Otu1833 Otu1834
## Saanich_010       0       0       0       6       0       6       0
## Saanich_100       0       0       0       0       0       0       5
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       4       6       6       0       2       0       0
## Saanich_200       2       0       0       0       4       0       0
##             Otu1835 Otu1836 Otu1837 Otu1838 Otu1839 Otu1840 Otu1841
## Saanich_010       3       5       0       0       0       5       0
## Saanich_100       2       0       3       0       0       0       5
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       2       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       5       5       0       0
##             Otu1842 Otu1843 Otu1844 Otu1845 Otu1846 Otu1847 Otu1848
## Saanich_010       0       0       0       0       5       0       0
## Saanich_100       5       0       0       0       0       0       0
## Saanich_120       0       5       5       5       0       5       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       5
##             Otu1849 Otu1850 Otu1851 Otu1852 Otu1853 Otu1854 Otu1855
## Saanich_010       0       0       0       3       0       0       5
## Saanich_100       5       5       0       0       0       5       0
## Saanich_120       0       0       0       2       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       5       0       5       0       0
##             Otu1856 Otu1857 Otu1858 Otu1859 Otu1860 Otu1861 Otu1862
## Saanich_010       5       0       0       0       0       5       5
## Saanich_100       0       2       0       5       2       0       0
## Saanich_120       0       3       0       0       3       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       5       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1863 Otu1864 Otu1865 Otu1866 Otu1867 Otu1868 Otu1869
## Saanich_010       0       0       5       0       0       0       0
## Saanich_100       0       5       0       0       5       2       5
## Saanich_120       0       0       0       5       0       3       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       3       0       0       0       0       0       0
##             Otu1870 Otu1871 Otu1872 Otu1873 Otu1874 Otu1875 Otu1876
## Saanich_010       0       5       0       0       5       5       0
## Saanich_100       0       0       0       0       0       0       5
## Saanich_120       0       0       3       0       0       0       0
## Saanich_135       3       0       0       0       0       0       0
## Saanich_150       0       0       2       5       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       0       0       0       0       0       0
##             Otu1877 Otu1878 Otu1879 Otu1880 Otu1881 Otu1882 Otu1883
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       5       5       0       0       0       5       5
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       3       0       0
## Saanich_150       0       0       5       0       2       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       5       0       0       0
##             Otu1884 Otu1885 Otu1886 Otu1887 Otu1888 Otu1889 Otu1890
## Saanich_010       5       0       0       0       0       5       0
## Saanich_100       0       0       5       5       5       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       3       0       0       0       0       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       5
##             Otu1891 Otu1892 Otu1893 Otu1894 Otu1895 Otu1896 Otu1897
## Saanich_010       5       0       5       0       0       0       0
## Saanich_100       0       3       0       5       5       2       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       3       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       2       0       0       0       0       5
##             Otu1898 Otu1899 Otu1900 Otu1901 Otu1902 Otu1903 Otu1904
## Saanich_010       0       0       0       0       0       5       0
## Saanich_100       0       5       5       5       5       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       3       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       5
##             Otu1905 Otu1906 Otu1907 Otu1908 Otu1909 Otu1910 Otu1911
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       3       0       5       0       0
## Saanich_120       5       3       2       0       0       5       5
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       5       0       0       0
##             Otu1912 Otu1913 Otu1914 Otu1915 Otu1916 Otu1917 Otu1918
## Saanich_010       2       0       0       0       0       5       0
## Saanich_100       3       0       0       0       0       0       0
## Saanich_120       0       3       5       0       0       0       0
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       5       0       0
## Saanich_200       0       0       0       5       0       0       5
##             Otu1919 Otu1920 Otu1921 Otu1922 Otu1923 Otu1924 Otu1925
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       2       0       0
## Saanich_120       5       2       5       0       0       0       4
## Saanich_135       0       3       0       0       0       0       0
## Saanich_150       0       0       0       0       2       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       5       0       4       0
##             Otu1926 Otu1927 Otu1928 Otu1929 Otu1930 Otu1931 Otu1932
## Saanich_010       4       4       0       4       0       2       0
## Saanich_100       0       0       0       0       0       2       0
## Saanich_120       0       0       0       0       0       0       2
## Saanich_135       0       0       0       0       0       0       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       4       0       4       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1933 Otu1934 Otu1935 Otu1936 Otu1937 Otu1938 Otu1939
## Saanich_010       4       4       0       0       0       0       0
## Saanich_100       0       0       0       0       0       2       0
## Saanich_120       0       0       0       4       4       0       4
## Saanich_135       0       0       4       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       2       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1940 Otu1941 Otu1942 Otu1943 Otu1944 Otu1945 Otu1946
## Saanich_010       0       2       2       0       0       0       0
## Saanich_100       0       2       0       4       4       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       0       0       0       0       0       0
## Saanich_165       2       0       0       0       0       4       4
## Saanich_200       0       0       2       0       0       0       0
##             Otu1947 Otu1948 Otu1949 Otu1950 Otu1951 Otu1952 Otu1953
## Saanich_010       0       0       0       0       2       0       2
## Saanich_100       0       0       0       0       0       2       2
## Saanich_120       0       0       0       4       0       2       0
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       2       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       4       4       0       0       0       0
##             Otu1954 Otu1955 Otu1956 Otu1957 Otu1958 Otu1959 Otu1960
## Saanich_010       4       2       4       0       0       2       0
## Saanich_100       0       0       0       0       0       0       4
## Saanich_120       0       2       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       2       0
## Saanich_165       0       0       0       4       4       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1961 Otu1962 Otu1963 Otu1964 Otu1965 Otu1966 Otu1967
## Saanich_010       0       0       2       0       0       0       0
## Saanich_100       0       4       2       2       4       0       4
## Saanich_120       4       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       2       0
## Saanich_150       0       0       0       2       0       0       0
## Saanich_165       0       0       0       0       0       2       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1968 Otu1969 Otu1970 Otu1971 Otu1972 Otu1973 Otu1974
## Saanich_010       0       0       0       0       2       4       4
## Saanich_100       0       2       0       2       2       0       0
## Saanich_120       2       2       4       2       0       0       0
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu1975 Otu1976 Otu1977 Otu1978 Otu1979 Otu1980 Otu1981
## Saanich_010       2       0       2       4       0       0       4
## Saanich_100       0       2       2       0       0       4       0
## Saanich_120       0       0       0       0       2       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       2       0       0       0       2       0       0
##             Otu1982 Otu1983 Otu1984 Otu1985 Otu1986 Otu1987 Otu1988
## Saanich_010       0       0       4       4       0       0       0
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       0       0       0       0       4       0       0
## Saanich_135       0       0       0       0       0       2       0
## Saanich_150       2       0       0       0       0       0       0
## Saanich_165       0       2       0       0       0       0       4
## Saanich_200       0       2       0       0       0       2       0
##             Otu1989 Otu1990 Otu1991 Otu1992 Otu1993 Otu1994 Otu1995
## Saanich_010       0       0       0       4       0       0       4
## Saanich_100       0       0       2       0       4       4       0
## Saanich_120       0       0       2       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       4       4       0       0       0       0       0
##             Otu1996 Otu1997 Otu1998 Otu1999 Otu2000 Otu2001 Otu2002
## Saanich_010       0       0       4       4       2       0       0
## Saanich_100       4       0       0       0       0       2       0
## Saanich_120       0       0       0       0       0       0       4
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       2       2       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       4       0       0       0       0       0
##             Otu2003 Otu2004 Otu2005 Otu2006 Otu2007 Otu2008 Otu2009
## Saanich_010       0       0       0       4       0       0       4
## Saanich_100       0       0       0       0       0       2       0
## Saanich_120       4       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       2       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       4       4       0       4       0       0
##             Otu2010 Otu2011 Otu2012 Otu2013 Otu2014 Otu2015 Otu2016
## Saanich_010       4       4       0       4       4       0       0
## Saanich_100       0       0       2       0       0       0       2
## Saanich_120       0       0       2       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       2       2
## Saanich_200       0       0       0       0       0       2       0
##             Otu2017 Otu2018 Otu2019 Otu2020 Otu2021 Otu2022 Otu2023
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       0       4       2       2       0
## Saanich_120       2       2       0       0       0       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       2       0       0
## Saanich_165       2       0       0       0       0       0       2
## Saanich_200       0       0       4       0       0       0       0
##             Otu2024 Otu2025 Otu2026 Otu2027 Otu2028 Otu2029 Otu2030
## Saanich_010       4       0       0       4       0       0       0
## Saanich_100       0       4       4       0       4       2       0
## Saanich_120       0       0       0       0       0       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       0       0       0       0       0       0
##             Otu2031 Otu2032 Otu2033 Otu2034 Otu2035 Otu2036 Otu2037
## Saanich_010       0       2       4       0       2       4       2
## Saanich_100       0       0       0       0       0       0       2
## Saanich_120       2       2       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       0       0       4       2       0       0
##             Otu2038 Otu2039 Otu2040 Otu2041 Otu2042 Otu2043 Otu2044
## Saanich_010       4       0       0       4       0       4       0
## Saanich_100       0       0       0       0       2       0       2
## Saanich_120       0       2       4       0       0       0       2
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       0       2       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2045 Otu2046 Otu2047 Otu2048 Otu2049 Otu2050 Otu2051
## Saanich_010       4       0       0       0       0       0       0
## Saanich_100       0       2       4       0       0       0       2
## Saanich_120       0       0       0       0       2       0       2
## Saanich_135       0       0       0       0       0       2       0
## Saanich_150       0       0       0       2       0       0       0
## Saanich_165       0       0       0       2       2       0       0
## Saanich_200       0       2       0       0       0       2       0
##             Otu2052 Otu2053 Otu2054 Otu2055 Otu2056 Otu2057 Otu2058
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       4
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       4       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       4       4       4       4       4       0       0
##             Otu2059 Otu2060 Otu2061 Otu2062 Otu2063 Otu2064 Otu2065
## Saanich_010       0       4       0       0       0       0       0
## Saanich_100       0       0       0       4       4       4       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       4       0       0       0       0       0       2
## Saanich_200       0       0       4       0       0       0       2
##             Otu2066 Otu2067 Otu2068 Otu2069 Otu2070 Otu2071 Otu2072
## Saanich_010       0       4       0       0       0       2       2
## Saanich_100       0       0       4       0       0       2       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       4       0       0       4       4       0       0
##             Otu2073 Otu2074 Otu2075 Otu2076 Otu2077 Otu2078 Otu2079
## Saanich_010       0       0       4       4       0       0       0
## Saanich_100       4       4       0       0       0       4       4
## Saanich_120       0       0       0       0       4       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2080 Otu2081 Otu2082 Otu2083 Otu2084 Otu2085 Otu2086
## Saanich_010       0       0       4       4       0       0       4
## Saanich_100       2       0       0       0       4       0       0
## Saanich_120       2       0       0       0       0       4       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       4       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2087 Otu2088 Otu2089 Otu2090 Otu2091 Otu2092 Otu2093
## Saanich_010       4       4       0       4       4       4       4
## Saanich_100       0       0       4       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2094 Otu2095 Otu2096 Otu2097 Otu2098 Otu2099 Otu2100
## Saanich_010       0       2       0       4       0       0       0
## Saanich_100       4       0       0       0       4       0       0
## Saanich_120       0       2       0       0       0       4       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       2
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       0       4       0       0       0       0
##             Otu2101 Otu2102 Otu2103 Otu2104 Otu2105 Otu2106 Otu2107
## Saanich_010       0       0       2       0       0       2       4
## Saanich_100       0       0       0       4       4       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       4       2       0       0       2       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       4       0       0       0       0       0       0
##             Otu2108 Otu2109 Otu2110 Otu2111 Otu2112 Otu2113 Otu2114
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       2       4
## Saanich_120       4       4       2       0       0       2       0
## Saanich_135       0       0       0       2       0       0       0
## Saanich_150       0       0       0       2       0       0       0
## Saanich_165       0       0       2       0       0       0       0
## Saanich_200       0       0       0       0       4       0       0
##             Otu2115 Otu2116 Otu2117 Otu2118 Otu2119 Otu2120 Otu2121
## Saanich_010       0       0       0       0       4       4       0
## Saanich_100       2       0       4       4       0       0       0
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       4       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       4
##             Otu2122 Otu2123 Otu2124 Otu2125 Otu2126 Otu2127 Otu2128
## Saanich_010       0       4       0       0       0       0       0
## Saanich_100       4       0       0       4       0       0       4
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       4       0
## Saanich_200       0       0       4       0       4       0       0
##             Otu2129 Otu2130 Otu2131 Otu2132 Otu2133 Otu2134 Otu2135
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       4       0
## Saanich_120       2       0       4       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       4
## Saanich_165       0       0       0       2       4       0       0
## Saanich_200       2       4       0       2       0       0       0
##             Otu2136 Otu2137 Otu2138 Otu2139 Otu2140 Otu2141 Otu2142
## Saanich_010       0       0       0       0       0       2       4
## Saanich_100       0       0       2       0       4       2       0
## Saanich_120       0       0       2       2       0       0       0
## Saanich_135       0       4       0       0       0       0       0
## Saanich_150       0       0       0       2       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       4       0       0       0       0       0       0
##             Otu2143 Otu2144 Otu2145 Otu2146 Otu2147 Otu2148 Otu2149
## Saanich_010       4       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       2       2       4       0       0
## Saanich_135       0       0       0       2       0       4       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       4       2       0       0       0       2
##             Otu2150 Otu2151 Otu2152 Otu2153 Otu2154 Otu2155 Otu2156
## Saanich_010       4       0       0       2       0       0       4
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       2       4       4       0
## Saanich_135       0       4       0       0       0       0       0
## Saanich_150       0       0       2       0       0       0       0
## Saanich_165       0       0       2       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2157 Otu2158 Otu2159 Otu2160 Otu2161 Otu2162 Otu2163
## Saanich_010       4       4       4       0       0       0       0
## Saanich_100       0       0       0       2       2       0       0
## Saanich_120       0       0       0       2       2       4       4
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2164 Otu2165 Otu2166 Otu2167 Otu2168 Otu2169 Otu2170
## Saanich_010       0       4       0       0       0       0       0
## Saanich_100       0       0       0       0       0       2       2
## Saanich_120       4       0       2       2       0       0       0
## Saanich_135       0       0       0       2       2       0       2
## Saanich_150       0       0       2       0       0       2       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       2       0       0
##             Otu2171 Otu2172 Otu2173 Otu2174 Otu2175 Otu2176 Otu2177
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       0       2       4       4       4
## Saanich_120       0       0       2       0       0       0       0
## Saanich_135       0       2       2       0       0       0       0
## Saanich_150       2       0       0       2       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2178 Otu2179 Otu2180 Otu2181 Otu2182 Otu2183 Otu2184
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       0       4       0       4
## Saanich_120       0       2       4       0       0       0       0
## Saanich_135       0       0       0       2       0       2       0
## Saanich_150       2       0       0       2       0       2       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2185 Otu2186 Otu2187 Otu2188 Otu2189 Otu2190 Otu2191
## Saanich_010       4       2       2       4       0       0       0
## Saanich_100       0       0       2       0       2       0       0
## Saanich_120       0       0       0       0       2       0       0
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       2
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       0       0       0       0       4       0
##             Otu2192 Otu2193 Otu2194 Otu2195 Otu2196 Otu2197 Otu2198
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       2       0       0       0       0       2
## Saanich_165       2       2       4       4       2       2       2
## Saanich_200       2       0       0       0       2       0       0
##             Otu2199 Otu2200 Otu2201 Otu2202 Otu2203 Otu2204 Otu2205
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       2       0       2       4       0
## Saanich_120       4       4       0       0       0       0       0
## Saanich_135       0       0       0       4       2       0       0
## Saanich_150       0       0       2       0       0       0       0
## Saanich_165       0       0       0       0       0       0       4
## Saanich_200       0       0       0       0       0       0       0
##             Otu2206 Otu2207 Otu2208 Otu2209 Otu2210 Otu2211 Otu2212
## Saanich_010       0       0       0       4       0       4       0
## Saanich_100       4       0       4       0       2       0       0
## Saanich_120       0       2       0       0       2       0       0
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       4
##             Otu2213 Otu2214 Otu2215 Otu2216 Otu2217 Otu2218 Otu2219
## Saanich_010       0       0       0       0       2       2       0
## Saanich_100       0       4       2       4       0       0       2
## Saanich_120       0       0       2       0       2       0       2
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       2       0       0       0       0       2       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2220 Otu2221 Otu2222 Otu2223 Otu2224 Otu2225 Otu2226
## Saanich_010       4       4       4       4       4       0       0
## Saanich_100       0       0       0       0       0       2       0
## Saanich_120       0       0       0       0       0       2       2
## Saanich_135       0       0       0       0       0       0       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2227 Otu2228 Otu2229 Otu2230 Otu2231 Otu2232 Otu2233
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       0       0       4       4       4
## Saanich_120       0       2       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       0       4       0       0       0       0
## Saanich_165       2       0       0       0       0       0       0
## Saanich_200       0       0       0       4       0       0       0
##             Otu2234 Otu2235 Otu2236 Otu2237 Otu2238 Otu2239 Otu2240
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       0       0       0       2       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       0       2       0       0       0       0
## Saanich_165       0       4       2       2       2       0       4
## Saanich_200       0       0       0       0       2       4       0
##             Otu2241 Otu2242 Otu2243 Otu2244 Otu2245 Otu2246 Otu2247
## Saanich_010       0       0       0       0       0       4       0
## Saanich_100       0       0       0       0       0       0       4
## Saanich_120       0       0       0       0       2       0       0
## Saanich_135       2       0       4       0       0       0       0
## Saanich_150       0       0       0       2       2       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       4       0       2       0       0       0
##             Otu2248 Otu2249 Otu2250 Otu2251 Otu2252 Otu2253 Otu2254
## Saanich_010       0       4       0       0       2       0       4
## Saanich_100       4       0       0       4       0       4       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       4       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2255 Otu2256 Otu2257 Otu2258 Otu2259 Otu2260 Otu2261
## Saanich_010       4       4       4       0       4       4       4
## Saanich_100       0       0       0       4       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2262 Otu2263 Otu2264 Otu2265 Otu2266 Otu2267 Otu2268
## Saanich_010       0       4       4       0       0       0       0
## Saanich_100       4       0       0       4       2       4       4
## Saanich_120       0       0       0       0       2       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2269 Otu2270 Otu2271 Otu2272 Otu2273 Otu2274 Otu2275
## Saanich_010       2       0       0       0       0       0       0
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       0       4       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       4
## Saanich_150       0       0       2       4       2       0       0
## Saanich_165       0       0       0       0       2       0       0
## Saanich_200       0       0       2       0       0       4       0
##             Otu2276 Otu2277 Otu2278 Otu2279 Otu2280 Otu2281 Otu2282
## Saanich_010       0       0       0       4       4       0       4
## Saanich_100       0       0       0       0       0       2       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       4       0       4       0       0       2       0
##             Otu2283 Otu2284 Otu2285 Otu2286 Otu2287 Otu2288 Otu2289
## Saanich_010       4       0       0       0       0       0       0
## Saanich_100       0       0       2       0       2       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       4       2       4       0       0       0
## Saanich_200       0       0       0       0       0       4       4
##             Otu2290 Otu2291 Otu2292 Otu2293 Otu2294 Otu2295 Otu2296
## Saanich_010       2       0       0       0       0       0       0
## Saanich_100       2       4       0       0       2       4       0
## Saanich_120       0       0       0       0       2       0       2
## Saanich_135       0       0       0       0       0       0       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       4       2       0       0       0
## Saanich_200       0       0       0       2       0       0       0
##             Otu2297 Otu2298 Otu2299 Otu2300 Otu2301 Otu2302 Otu2303
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       4       0       0       0       0       0       0
## Saanich_120       0       2       0       0       0       0       4
## Saanich_135       0       0       0       2       2       0       0
## Saanich_150       0       2       0       0       2       0       0
## Saanich_165       0       0       0       2       0       4       0
## Saanich_200       0       0       4       0       0       0       0
##             Otu2304 Otu2305 Otu2306 Otu2307 Otu2308 Otu2309 Otu2310
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       2       4       0       0       0       4       0
## Saanich_135       0       0       2       0       2       0       0
## Saanich_150       0       0       2       0       0       0       0
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       0       0       4       2       0       2
##             Otu2311 Otu2312 Otu2313 Otu2314 Otu2315 Otu2316 Otu2317
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       0       0       2       0
## Saanich_120       0       0       2       0       0       0       0
## Saanich_135       0       2       0       2       2       2       0
## Saanich_150       2       2       0       2       0       0       4
## Saanich_165       0       0       2       0       2       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2318 Otu2319 Otu2320 Otu2321 Otu2322 Otu2323 Otu2324
## Saanich_010       0       0       0       0       0       0       4
## Saanich_100       0       0       0       4       0       0       0
## Saanich_120       0       0       4       0       2       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       4       4       0       0       0       0       0
## Saanich_200       0       0       0       0       2       2       0
##             Otu2325 Otu2326 Otu2327 Otu2328 Otu2329 Otu2330 Otu2331
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       2       0       0
## Saanich_120       0       0       0       0       2       4       0
## Saanich_135       0       0       0       2       0       0       0
## Saanich_150       0       0       0       2       0       0       0
## Saanich_165       4       0       0       0       0       0       0
## Saanich_200       0       4       4       0       0       0       4
##             Otu2332 Otu2333 Otu2334 Otu2335 Otu2336 Otu2337 Otu2338
## Saanich_010       2       0       0       0       4       0       4
## Saanich_100       0       4       4       4       0       4       0
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2339 Otu2340 Otu2341 Otu2342 Otu2343 Otu2344 Otu2345
## Saanich_010       0       2       0       0       0       0       0
## Saanich_100       0       0       3       3       3       3       3
## Saanich_120       4       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       2       0       0       0       0       0
##             Otu2346 Otu2347 Otu2348 Otu2349 Otu2350 Otu2351 Otu2352
## Saanich_010       0       0       0       0       0       3       0
## Saanich_100       3       0       3       0       3       0       3
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       3       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       3       0       0       0
##             Otu2353 Otu2354 Otu2355 Otu2356 Otu2357 Otu2358 Otu2359
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       3
## Saanich_120       0       3       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       3       0       0       0       0       0       0
## Saanich_165       0       0       0       3       3       3       0
## Saanich_200       0       0       3       0       0       0       0
##             Otu2360 Otu2361 Otu2362 Otu2363 Otu2364 Otu2365 Otu2366
## Saanich_010       3       0       0       0       0       0       0
## Saanich_100       0       0       3       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       3       0       0       0       3       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       3       3       0       3
## Saanich_200       0       0       0       0       0       0       0
##             Otu2367 Otu2368 Otu2369 Otu2370 Otu2371 Otu2372 Otu2373
## Saanich_010       0       0       0       3       0       0       3
## Saanich_100       0       3       3       0       3       3       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       3       0       0       0       0       0       0
##             Otu2374 Otu2375 Otu2376 Otu2377 Otu2378 Otu2379 Otu2380
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       3       0       3       3       3       0
## Saanich_120       3       0       3       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       3
##             Otu2381 Otu2382 Otu2383 Otu2384 Otu2385 Otu2386 Otu2387
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       3       3       3       3       3
## Saanich_120       3       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       3       0       0       0       0       0
##             Otu2388 Otu2389 Otu2390 Otu2391 Otu2392 Otu2393 Otu2394
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       3       3       0       0       3       3       3
## Saanich_120       0       0       3       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       3       0       0       0
##             Otu2395 Otu2396 Otu2397 Otu2398 Otu2399 Otu2400 Otu2401
## Saanich_010       0       0       0       0       0       0       3
## Saanich_100       0       0       3       0       0       3       0
## Saanich_120       3       3       0       0       3       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       3       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2402 Otu2403 Otu2404 Otu2405 Otu2406 Otu2407 Otu2408
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       3       3       0       0       3       0
## Saanich_120       0       0       0       3       3       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       3
## Saanich_165       3       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2409 Otu2410 Otu2411 Otu2412 Otu2413 Otu2414 Otu2415
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       3       3       0
## Saanich_120       3       3       3       3       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       3
## Saanich_200       0       0       0       0       0       0       0
##             Otu2416 Otu2417 Otu2418 Otu2419 Otu2420 Otu2421 Otu2422
## Saanich_010       0       0       0       0       3       0       0
## Saanich_100       3       3       3       0       0       0       0
## Saanich_120       0       0       0       0       0       3       3
## Saanich_135       0       0       0       3       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2423 Otu2424 Otu2425 Otu2426 Otu2427 Otu2428 Otu2429
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       3       0       0       3       0       0       3
## Saanich_120       0       3       3       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       3       3       0
##             Otu2430 Otu2431 Otu2432 Otu2433 Otu2434 Otu2435 Otu2436
## Saanich_010       0       0       3       0       3       0       0
## Saanich_100       3       3       0       0       0       3       3
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       3       0       0       0
##             Otu2437 Otu2438 Otu2439 Otu2440 Otu2441 Otu2442 Otu2443
## Saanich_010       0       0       3       0       0       0       0
## Saanich_100       3       3       0       0       0       3       0
## Saanich_120       0       0       0       3       3       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       3
##             Otu2444 Otu2445 Otu2446 Otu2447 Otu2448 Otu2449 Otu2450
## Saanich_010       0       0       3       0       0       0       0
## Saanich_100       0       3       0       0       3       3       3
## Saanich_120       0       0       0       3       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       3       0       0       0       0       0       0
##             Otu2451 Otu2452 Otu2453 Otu2454 Otu2455 Otu2456 Otu2457
## Saanich_010       0       0       0       0       0       3       0
## Saanich_100       3       0       0       0       3       0       3
## Saanich_120       0       0       0       3       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       3       0       0       0       0       0
## Saanich_200       0       0       3       0       0       0       0
##             Otu2458 Otu2459 Otu2460 Otu2461 Otu2462 Otu2463 Otu2464
## Saanich_010       0       0       3       0       0       0       0
## Saanich_100       3       3       0       3       3       0       3
## Saanich_120       0       0       0       0       0       3       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2465 Otu2466 Otu2467 Otu2468 Otu2469 Otu2470 Otu2471
## Saanich_010       3       0       3       3       0       0       3
## Saanich_100       0       0       0       0       0       3       0
## Saanich_120       0       0       0       0       3       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       3       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2472 Otu2473 Otu2474 Otu2475 Otu2476 Otu2477 Otu2478
## Saanich_010       3       3       0       0       0       0       0
## Saanich_100       0       0       0       3       0       0       3
## Saanich_120       0       0       3       0       3       3       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2479 Otu2480 Otu2481 Otu2482 Otu2483 Otu2484 Otu2485
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       3       3       3       3       3       0       0
## Saanich_120       0       0       0       0       0       0       3
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       3       0
##             Otu2486 Otu2487 Otu2488 Otu2489 Otu2490 Otu2491 Otu2492
## Saanich_010       0       0       0       3       0       0       0
## Saanich_100       3       0       3       0       0       0       0
## Saanich_120       0       3       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       3
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       3       0
## Saanich_200       0       0       0       0       3       0       0
##             Otu2493 Otu2494 Otu2495 Otu2496 Otu2497 Otu2498 Otu2499
## Saanich_010       3       3       0       0       0       0       0
## Saanich_100       0       0       0       0       0       3       3
## Saanich_120       0       0       0       3       0       0       0
## Saanich_135       0       0       3       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       3       0       0
##             Otu2500 Otu2501 Otu2502 Otu2503 Otu2504 Otu2505 Otu2506
## Saanich_010       3       0       3       3       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       3       3       3
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       3       0       0       0       0       0
##             Otu2507 Otu2508 Otu2509 Otu2510 Otu2511 Otu2512 Otu2513
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       3       0       0       0       3       0
## Saanich_120       3       0       3       3       0       0       0
## Saanich_135       0       0       0       0       0       0       3
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       3       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2514 Otu2515 Otu2516 Otu2517 Otu2518 Otu2519 Otu2520
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       3       0       3       0       3       3       3
## Saanich_120       0       0       0       3       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       3       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2521 Otu2522 Otu2523 Otu2524 Otu2525 Otu2526 Otu2527
## Saanich_010       0       0       3       0       0       0       0
## Saanich_100       3       0       0       3       3       0       0
## Saanich_120       0       0       0       0       0       3       3
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       3       0       0       0       0       0
##             Otu2528 Otu2529 Otu2530 Otu2531 Otu2532 Otu2533 Otu2534
## Saanich_010       3       0       0       3       3       0       0
## Saanich_100       0       0       3       0       0       3       0
## Saanich_120       0       3       0       0       0       0       3
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2535 Otu2536 Otu2537 Otu2538 Otu2539 Otu2540 Otu2541
## Saanich_010       0       3       3       3       3       3       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       3       0       0       0       0       0       3
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2542 Otu2543 Otu2544 Otu2545 Otu2546 Otu2547 Otu2548
## Saanich_010       0       0       0       3       0       0       0
## Saanich_100       0       0       0       0       3       0       3
## Saanich_120       3       3       3       0       0       3       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2549 Otu2550 Otu2551 Otu2552 Otu2553 Otu2554 Otu2555
## Saanich_010       0       3       0       3       3       0       0
## Saanich_100       3       0       3       0       0       0       0
## Saanich_120       0       0       0       0       0       3       3
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2556 Otu2557 Otu2558 Otu2559 Otu2560 Otu2561 Otu2562
## Saanich_010       0       0       0       0       0       0       3
## Saanich_100       0       3       3       3       3       3       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       3       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2563 Otu2564 Otu2565 Otu2566 Otu2567 Otu2568 Otu2569
## Saanich_010       0       0       0       0       0       3       0
## Saanich_100       0       0       0       0       3       0       3
## Saanich_120       0       0       0       3       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       3       3       3       0       0       0       0
##             Otu2570 Otu2571 Otu2572 Otu2573 Otu2574 Otu2575 Otu2576
## Saanich_010       3       0       0       3       0       0       0
## Saanich_100       0       3       0       0       0       0       3
## Saanich_120       0       0       0       0       3       0       0
## Saanich_135       0       0       3       0       0       0       0
## Saanich_150       0       0       0       0       0       3       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2577 Otu2578 Otu2579 Otu2580 Otu2581 Otu2582 Otu2583
## Saanich_010       3       3       2       2       2       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       2       2
##             Otu2584 Otu2585 Otu2586 Otu2587 Otu2588 Otu2589 Otu2590
## Saanich_010       2       0       0       0       2       2       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       2       0       0       0       0       0
## Saanich_165       0       0       2       2       0       0       2
## Saanich_200       0       0       0       0       0       0       0
##             Otu2591 Otu2592 Otu2593 Otu2594 Otu2595 Otu2596 Otu2597
## Saanich_010       0       0       2       0       0       2       2
## Saanich_100       0       0       0       0       2       0       0
## Saanich_120       2       2       0       2       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2598 Otu2599 Otu2600 Otu2601 Otu2602 Otu2603 Otu2604
## Saanich_010       0       0       0       2       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       2       2       0       0       0       0
## Saanich_150       2       0       0       0       0       0       2
## Saanich_165       0       0       0       0       2       2       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2605 Otu2606 Otu2607 Otu2608 Otu2609 Otu2610 Otu2611
## Saanich_010       0       0       0       0       0       2       0
## Saanich_100       0       0       2       2       0       0       2
## Saanich_120       2       0       0       0       2       0       0
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2612 Otu2613 Otu2614 Otu2615 Otu2616 Otu2617 Otu2618
## Saanich_010       0       0       2       0       2       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       2       0       0       0       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       2       0       2       0       0       2
##             Otu2619 Otu2620 Otu2621 Otu2622 Otu2623 Otu2624 Otu2625
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       2       2       0
## Saanich_120       2       0       0       0       0       0       2
## Saanich_135       0       2       2       0       0       0       0
## Saanich_150       0       0       0       2       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2626 Otu2627 Otu2628 Otu2629 Otu2630 Otu2631 Otu2632
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       2
## Saanich_120       2       0       0       0       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       2       2       2       0       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2633 Otu2634 Otu2635 Otu2636 Otu2637 Otu2638 Otu2639
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       0       0       0       0       2
## Saanich_120       0       0       2       0       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       2       2       0       0
##             Otu2640 Otu2641 Otu2642 Otu2643 Otu2644 Otu2645 Otu2646
## Saanich_010       0       0       2       0       0       0       0
## Saanich_100       2       2       0       2       0       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2647 Otu2648 Otu2649 Otu2650 Otu2651 Otu2652 Otu2653
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       0       2       2       2       2       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2654 Otu2655 Otu2656 Otu2657 Otu2658 Otu2659 Otu2660
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       2       0       2       2       2       2       2
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2661 Otu2662 Otu2663 Otu2664 Otu2665 Otu2666 Otu2667
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       2       0       0       0
## Saanich_120       2       2       2       0       2       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2668 Otu2669 Otu2670 Otu2671 Otu2672 Otu2673 Otu2674
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       2       2       2       0
## Saanich_120       2       2       2       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2675 Otu2676 Otu2677 Otu2678 Otu2679 Otu2680 Otu2681
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       2       2       0       0
## Saanich_120       2       2       2       0       0       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2682 Otu2683 Otu2684 Otu2685 Otu2686 Otu2687 Otu2688
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       0       0       0       2       2
## Saanich_120       0       0       0       0       2       0       0
## Saanich_135       2       0       2       2       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2689 Otu2690 Otu2691 Otu2692 Otu2693 Otu2694 Otu2695
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       0       0       2       2       2
## Saanich_120       0       0       2       2       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2696 Otu2697 Otu2698 Otu2699 Otu2700 Otu2701 Otu2702
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       2       2       0       0
## Saanich_120       0       0       0       0       0       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2703 Otu2704 Otu2705 Otu2706 Otu2707 Otu2708 Otu2709
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       2       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2710 Otu2711 Otu2712 Otu2713 Otu2714 Otu2715 Otu2716
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       2       0       2       2
## Saanich_120       0       0       0       0       2       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2717 Otu2718 Otu2719 Otu2720 Otu2721 Otu2722 Otu2723
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       2       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2724 Otu2725 Otu2726 Otu2727 Otu2728 Otu2729 Otu2730
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       2       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2731 Otu2732 Otu2733 Otu2734 Otu2735 Otu2736 Otu2737
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       0       2       2       0
## Saanich_120       0       2       2       2       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2738 Otu2739 Otu2740 Otu2741 Otu2742 Otu2743 Otu2744
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       2       2       2       2       2       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2745 Otu2746 Otu2747 Otu2748 Otu2749 Otu2750 Otu2751
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       2       0       0       0
## Saanich_120       2       0       0       0       2       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2752 Otu2753 Otu2754 Otu2755 Otu2756 Otu2757 Otu2758
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       2       2       2       2
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2759 Otu2760 Otu2761 Otu2762 Otu2763 Otu2764 Otu2765
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       2       2       0       0       0
## Saanich_120       2       2       0       0       2       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2766 Otu2767 Otu2768 Otu2769 Otu2770 Otu2771 Otu2772
## Saanich_010       0       0       0       0       0       0       2
## Saanich_100       0       0       0       0       2       2       0
## Saanich_120       2       2       2       2       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2773 Otu2774 Otu2775 Otu2776 Otu2777 Otu2778 Otu2779
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       2       0       0       0       0
## Saanich_150       0       2       0       0       0       0       0
## Saanich_165       0       0       0       2       2       2       2
## Saanich_200       0       0       0       0       0       0       0
##             Otu2780 Otu2781 Otu2782 Otu2783 Otu2784 Otu2785 Otu2786
## Saanich_010       0       0       0       0       2       0       0
## Saanich_100       0       2       0       0       0       0       0
## Saanich_120       0       0       0       2       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       2       0       0       0       0       0       2
## Saanich_200       0       0       2       0       0       2       0
##             Otu2787 Otu2788 Otu2789 Otu2790 Otu2791 Otu2792 Otu2793
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       2       2       0
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       2       2       2       0       0       2
##             Otu2794 Otu2795 Otu2796 Otu2797 Otu2798 Otu2799 Otu2800
## Saanich_010       2       2       0       0       2       0       0
## Saanich_100       0       0       2       2       0       0       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       2       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2801 Otu2802 Otu2803 Otu2804 Otu2805 Otu2806 Otu2807
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       2       0       0       0
## Saanich_120       0       0       2       0       2       2       0
## Saanich_135       2       0       0       0       0       0       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       2       0       0       0       0       0
##             Otu2808 Otu2809 Otu2810 Otu2811 Otu2812 Otu2813 Otu2814
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       2
## Saanich_120       1       0       2       0       0       0       0
## Saanich_135       0       0       0       0       0       2       0
## Saanich_150       1       2       0       0       0       0       0
## Saanich_165       0       0       0       0       2       0       0
## Saanich_200       0       0       0       2       0       0       0
##             Otu2815 Otu2816 Otu2817 Otu2818 Otu2819 Otu2820 Otu2821
## Saanich_010       2       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       2       2       2       2       0
## Saanich_135       0       2       0       0       0       0       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2822 Otu2823 Otu2824 Otu2825 Otu2826 Otu2827 Otu2828
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       2       2       2       2       2
##             Otu2829 Otu2830 Otu2831 Otu2832 Otu2833 Otu2834 Otu2835
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       0       2       2       2       2
## Saanich_120       0       0       2       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       2       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2836 Otu2837 Otu2838 Otu2839 Otu2840 Otu2841 Otu2842
## Saanich_010       2       2       0       0       0       0       0
## Saanich_100       0       0       2       2       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2843 Otu2844 Otu2845 Otu2846 Otu2847 Otu2848 Otu2849
## Saanich_010       2       0       0       2       0       0       0
## Saanich_100       0       2       0       0       0       0       2
## Saanich_120       0       0       0       0       2       2       0
## Saanich_135       0       0       2       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2850 Otu2851 Otu2852 Otu2853 Otu2854 Otu2855 Otu2856
## Saanich_010       0       0       0       2       0       0       0
## Saanich_100       2       0       2       0       0       2       0
## Saanich_120       0       2       0       0       2       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2857 Otu2858 Otu2859 Otu2860 Otu2861 Otu2862 Otu2863
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       2       2
## Saanich_120       0       2       2       0       0       0       0
## Saanich_135       2       0       0       2       2       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2864 Otu2865 Otu2866 Otu2867 Otu2868 Otu2869 Otu2870
## Saanich_010       0       0       0       0       0       0       2
## Saanich_100       2       2       0       0       2       0       0
## Saanich_120       0       0       2       2       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2871 Otu2872 Otu2873 Otu2874 Otu2875 Otu2876 Otu2877
## Saanich_010       2       0       0       0       0       0       0
## Saanich_100       0       2       0       0       2       2       0
## Saanich_120       0       0       2       2       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       2
##             Otu2878 Otu2879 Otu2880 Otu2881 Otu2882 Otu2883 Otu2884
## Saanich_010       0       2       2       0       0       0       0
## Saanich_100       2       0       0       0       2       2       2
## Saanich_120       0       0       0       2       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2885 Otu2886 Otu2887 Otu2888 Otu2889 Otu2890 Otu2891
## Saanich_010       0       0       0       0       0       0       2
## Saanich_100       0       0       2       0       0       2       0
## Saanich_120       0       2       0       0       2       0       0
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       2       0       0       0
##             Otu2892 Otu2893 Otu2894 Otu2895 Otu2896 Otu2897 Otu2898
## Saanich_010       0       0       0       2       0       2       0
## Saanich_100       2       2       2       0       0       0       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       2       0       0
##             Otu2899 Otu2900 Otu2901 Otu2902 Otu2903 Otu2904 Otu2905
## Saanich_010       0       0       2       0       0       0       2
## Saanich_100       0       0       0       2       2       2       0
## Saanich_120       0       2       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       0       0       0       0       0       0
##             Otu2906 Otu2907 Otu2908 Otu2909 Otu2910 Otu2911 Otu2912
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       2       2       2       2       2
## Saanich_120       2       2       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2913 Otu2914 Otu2915 Otu2916 Otu2917 Otu2918 Otu2919
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       0       0       0       2
## Saanich_120       0       0       0       2       2       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2920 Otu2921 Otu2922 Otu2923 Otu2924 Otu2925 Otu2926
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       0       2       0       2
## Saanich_120       0       0       0       2       0       2       0
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2927 Otu2928 Otu2929 Otu2930 Otu2931 Otu2932 Otu2933
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       2       2       2       0
## Saanich_120       0       2       0       0       0       0       2
## Saanich_135       0       0       2       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2934 Otu2935 Otu2936 Otu2937 Otu2938 Otu2939 Otu2940
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       0       2       2       2       0
## Saanich_120       0       0       2       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2941 Otu2942 Otu2943 Otu2944 Otu2945 Otu2946 Otu2947
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       0       2       2       2
## Saanich_120       2       0       0       2       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2948 Otu2949 Otu2950 Otu2951 Otu2952 Otu2953 Otu2954
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       0       0       0       0
## Saanich_120       0       0       0       2       0       2       2
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2955 Otu2956 Otu2957 Otu2958 Otu2959 Otu2960 Otu2961
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       2       0       0       2
## Saanich_120       2       2       2       0       2       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2962 Otu2963 Otu2964 Otu2965 Otu2966 Otu2967 Otu2968
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       0       0       0       0
## Saanich_120       2       0       0       2       2       0       2
## Saanich_135       0       0       0       0       0       2       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2969 Otu2970 Otu2971 Otu2972 Otu2973 Otu2974 Otu2975
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       0       0       0       0       2
## Saanich_120       2       0       2       2       2       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2976 Otu2977 Otu2978 Otu2979 Otu2980 Otu2981 Otu2982
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       2       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2983 Otu2984 Otu2985 Otu2986 Otu2987 Otu2988 Otu2989
## Saanich_010       0       2       2       2       0       0       0
## Saanich_100       2       0       0       0       0       2       2
## Saanich_120       0       0       0       0       2       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2990 Otu2991 Otu2992 Otu2993 Otu2994 Otu2995 Otu2996
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       2       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu2997 Otu2998 Otu2999 Otu3000 Otu3001 Otu3002 Otu3003
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       2       2       0       0
## Saanich_120       0       0       0       0       0       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3004 Otu3005 Otu3006 Otu3007 Otu3008 Otu3009 Otu3010
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       2       2       2       2       0
## Saanich_120       2       2       0       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3011 Otu3012 Otu3013 Otu3014 Otu3015 Otu3016 Otu3017
## Saanich_010       0       2       0       0       0       0       0
## Saanich_100       2       0       0       2       2       2       0
## Saanich_120       0       0       2       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3018 Otu3019 Otu3020 Otu3021 Otu3022 Otu3023 Otu3024
## Saanich_010       0       0       0       0       0       2       0
## Saanich_100       0       0       0       0       0       0       2
## Saanich_120       2       2       2       2       2       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3025 Otu3026 Otu3027 Otu3028 Otu3029 Otu3030 Otu3031
## Saanich_010       0       0       2       0       0       0       0
## Saanich_100       0       2       0       0       0       2       0
## Saanich_120       2       0       0       2       2       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3032 Otu3033 Otu3034 Otu3035 Otu3036 Otu3037 Otu3038
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       0       0       0       2       2
## Saanich_120       2       0       2       2       2       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3039 Otu3040 Otu3041 Otu3042 Otu3043 Otu3044 Otu3045
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       0       0       2       0       2
## Saanich_120       0       0       2       2       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3046 Otu3047 Otu3048 Otu3049 Otu3050 Otu3051 Otu3052
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       2       0       0       0
## Saanich_120       0       2       2       0       2       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3053 Otu3054 Otu3055 Otu3056 Otu3057 Otu3058 Otu3059
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       0       2       2       2       0
## Saanich_120       0       0       2       0       0       0       2
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3060 Otu3061 Otu3062 Otu3063 Otu3064 Otu3065 Otu3066
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       0       2       0       2
## Saanich_120       0       0       0       2       0       2       0
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3067 Otu3068 Otu3069 Otu3070 Otu3071 Otu3072 Otu3073
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       2       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3074 Otu3075 Otu3076 Otu3077 Otu3078 Otu3079 Otu3080
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       2       2       2       0
## Saanich_120       0       0       0       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3081 Otu3082 Otu3083 Otu3084 Otu3085 Otu3086 Otu3087
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       0       2       2       2       2
## Saanich_120       0       0       2       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3088 Otu3089 Otu3090 Otu3091 Otu3092 Otu3093 Otu3094
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       2       2       0       2       2
## Saanich_120       0       2       0       0       2       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3095 Otu3096 Otu3097 Otu3098 Otu3099 Otu3100 Otu3101
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       2       0       2       0       2
## Saanich_120       2       2       0       2       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3102 Otu3103 Otu3104 Otu3105 Otu3106 Otu3107 Otu3108
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       2       0       0       2       2
## Saanich_120       0       2       0       2       2       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3109 Otu3110 Otu3111 Otu3112 Otu3113 Otu3114 Otu3115
## Saanich_010       0       0       0       2       0       0       0
## Saanich_100       0       2       2       0       2       0       2
## Saanich_120       2       0       0       0       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3116 Otu3117 Otu3118 Otu3119 Otu3120 Otu3121 Otu3122
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       0       0       2       0
## Saanich_120       0       0       0       2       2       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3123 Otu3124 Otu3125 Otu3126 Otu3127 Otu3128 Otu3129
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       2       0       0
## Saanich_120       2       2       2       2       0       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3130 Otu3131 Otu3132 Otu3133 Otu3134 Otu3135 Otu3136
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       2       2       0       0       2
## Saanich_120       0       2       0       0       2       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3137 Otu3138 Otu3139 Otu3140 Otu3141 Otu3142 Otu3143
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       0       2       0       0       2
## Saanich_120       0       0       2       0       2       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3144 Otu3145 Otu3146 Otu3147 Otu3148 Otu3149 Otu3150
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       2       0       0       2
## Saanich_120       0       2       2       0       2       0       0
## Saanich_135       0       0       0       0       0       2       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3151 Otu3152 Otu3153 Otu3154 Otu3155 Otu3156 Otu3157
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       2       0       2       2
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3158 Otu3159 Otu3160 Otu3161 Otu3162 Otu3163 Otu3164
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       0       2       0       2
## Saanich_120       2       0       0       2       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3165 Otu3166 Otu3167 Otu3168 Otu3169 Otu3170 Otu3171
## Saanich_010       0       0       2       2       0       0       0
## Saanich_100       2       0       0       0       2       0       0
## Saanich_120       0       2       0       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       2       0
##             Otu3172 Otu3173 Otu3174 Otu3175 Otu3176 Otu3177 Otu3178
## Saanich_010       2       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       2
## Saanich_120       0       2       2       0       2       0       0
## Saanich_135       0       0       0       2       0       0       0
## Saanich_150       0       0       0       0       0       2       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3179 Otu3180 Otu3181 Otu3182 Otu3183 Otu3184 Otu3185
## Saanich_010       2       0       0       0       0       2       0
## Saanich_100       0       2       0       2       0       0       0
## Saanich_120       0       0       2       0       2       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3186 Otu3187 Otu3188 Otu3189 Otu3190 Otu3191 Otu3192
## Saanich_010       2       2       0       2       0       2       0
## Saanich_100       0       0       2       0       0       0       0
## Saanich_120       0       0       0       0       2       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3193 Otu3194 Otu3195 Otu3196 Otu3197 Otu3198 Otu3199
## Saanich_010       0       2       2       2       0       0       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       2       0       0       0       0       2       0
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3200 Otu3201 Otu3202 Otu3203 Otu3204 Otu3205 Otu3206
## Saanich_010       0       0       2       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       2       0       2
## Saanich_150       2       2       0       0       0       2       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       2       0       0       0
##             Otu3207 Otu3208 Otu3209 Otu3210 Otu3211 Otu3212 Otu3213
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       0       0       0       0       0
## Saanich_120       2       0       2       2       0       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       2       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3214 Otu3215 Otu3216 Otu3217 Otu3218 Otu3219 Otu3220
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       2       2       0       0       0
## Saanich_120       2       2       0       0       0       0       2
## Saanich_135       0       0       0       0       2       2       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3221 Otu3222 Otu3223 Otu3224 Otu3225 Otu3226 Otu3227
## Saanich_010       0       0       2       0       0       2       0
## Saanich_100       2       0       0       0       2       0       2
## Saanich_120       0       0       0       2       0       0       0
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3228 Otu3229 Otu3230 Otu3231 Otu3232 Otu3233 Otu3234
## Saanich_010       0       0       0       2       0       0       2
## Saanich_100       0       0       0       0       2       0       0
## Saanich_120       0       2       2       0       0       0       0
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       2       0
##             Otu3235 Otu3236 Otu3237 Otu3238 Otu3239 Otu3240 Otu3241
## Saanich_010       2       0       2       2       2       2       0
## Saanich_100       0       2       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3242 Otu3243 Otu3244 Otu3245 Otu3246 Otu3247 Otu3248
## Saanich_010       0       0       0       0       0       0       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       2       0       0       2       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       2       2       0       0
##             Otu3249 Otu3250 Otu3251 Otu3252 Otu3253 Otu3254 Otu3255
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       2       0       0
## Saanich_120       0       0       0       0       0       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       2       2       2       0       0       0
##             Otu3256 Otu3257 Otu3258 Otu3259 Otu3260 Otu3261 Otu3262
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       2       0       0
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       2       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       2       2       0       2       2
##             Otu3263 Otu3264 Otu3265 Otu3266 Otu3267 Otu3268 Otu3269
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       2       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       2       0       0       0       0       0
## Saanich_165       0       0       0       2       0       2       2
## Saanich_200       0       0       0       0       2       0       0
##             Otu3270 Otu3271 Otu3272 Otu3273 Otu3274 Otu3275 Otu3276
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       2       0       0       0
## Saanich_120       0       0       2       0       0       0       0
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       0       0       0       0       0       2       2
##             Otu3277 Otu3278 Otu3279 Otu3280 Otu3281 Otu3282 Otu3283
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       0       0       2       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       2       2       0       2       0
##             Otu3284 Otu3285 Otu3286 Otu3287 Otu3288 Otu3289 Otu3290
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       0       0       0       0       0
## Saanich_120       0       0       2       2       2       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3291 Otu3292 Otu3293 Otu3294 Otu3295 Otu3296 Otu3297
## Saanich_010       0       0       0       0       2       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       2       2       0       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       2       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       2       2       0       0       0
##             Otu3298 Otu3299 Otu3300 Otu3301 Otu3302 Otu3303 Otu3304
## Saanich_010       0       0       0       0       2       2       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       2       2       2       2       0       0       0
##             Otu3305 Otu3306 Otu3307 Otu3308 Otu3309 Otu3310 Otu3311
## Saanich_010       2       2       2       2       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       2       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3312 Otu3313 Otu3314 Otu3315 Otu3316 Otu3317 Otu3318
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       2       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       0       0       0       0       0       0
## Saanich_165       0       0       2       0       0       0       2
## Saanich_200       0       2       0       2       2       0       0
##             Otu3319 Otu3320 Otu3321 Otu3322 Otu3323 Otu3324 Otu3325
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       2       0
## Saanich_120       0       0       0       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       0       0       0       0       0       0
## Saanich_165       0       0       0       2       2       0       0
## Saanich_200       0       2       2       0       0       0       0
##             Otu3326 Otu3327 Otu3328 Otu3329 Otu3330 Otu3331 Otu3332
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       2       2       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       2       0       0       2       2       2
##             Otu3333 Otu3334 Otu3335 Otu3336 Otu3337 Otu3338 Otu3339
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       2       0       2       0       0       0
## Saanich_135       0       0       2       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       2       0       0
## Saanich_200       2       0       0       0       0       2       2
##             Otu3340 Otu3341 Otu3342 Otu3343 Otu3344 Otu3345 Otu3346
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       2       0       2       0
## Saanich_120       0       0       0       0       2       0       0
## Saanich_135       0       0       0       0       0       0       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       2       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3347 Otu3348 Otu3349 Otu3350 Otu3351 Otu3352 Otu3353
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       2       0       0       0       0       0       2
## Saanich_200       0       2       2       2       2       2       0
##             Otu3354 Otu3355 Otu3356 Otu3357 Otu3358 Otu3359 Otu3360
## Saanich_010       2       2       2       2       0       0       0
## Saanich_100       0       0       0       0       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3361 Otu3362 Otu3363 Otu3364 Otu3365 Otu3366 Otu3367
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       0       2       2       0
## Saanich_120       0       2       2       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       2       0       0       0
##             Otu3368 Otu3369 Otu3370 Otu3371 Otu3372 Otu3373 Otu3374
## Saanich_010       0       2       0       0       0       0       2
## Saanich_100       0       0       0       2       0       0       0
## Saanich_120       2       0       0       0       0       2       0
## Saanich_135       0       0       2       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       2       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3375 Otu3376 Otu3377 Otu3378 Otu3379 Otu3380 Otu3381
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       2
## Saanich_120       2       2       0       0       0       0       0
## Saanich_135       0       0       2       0       0       0       0
## Saanich_150       0       0       0       0       0       2       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       2       2       0       0
##             Otu3382 Otu3383 Otu3384 Otu3385 Otu3386 Otu3387 Otu3388
## Saanich_010       0       0       2       0       0       0       0
## Saanich_100       0       0       0       2       0       0       0
## Saanich_120       2       0       0       0       2       2       2
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3389 Otu3390 Otu3391 Otu3392 Otu3393 Otu3394 Otu3395
## Saanich_010       0       0       2       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       2       0       0       0       2       2
## Saanich_165       0       0       0       2       2       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3396 Otu3397 Otu3398 Otu3399 Otu3400 Otu3401 Otu3402
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       2       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       2       0       0       0       0       0
## Saanich_165       0       0       2       2       0       0       2
## Saanich_200       0       0       0       0       0       0       0
##             Otu3403 Otu3404 Otu3405 Otu3406 Otu3407 Otu3408 Otu3409
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       2       2       2       0       0
## Saanich_120       2       0       0       0       0       2       2
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3410 Otu3411 Otu3412 Otu3413 Otu3414 Otu3415 Otu3416
## Saanich_010       0       0       0       0       0       0       2
## Saanich_100       0       0       0       2       2       0       0
## Saanich_120       2       2       2       0       0       0       0
## Saanich_135       0       0       0       0       0       2       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3417 Otu3418 Otu3419 Otu3420 Otu3421 Otu3422 Otu3423
## Saanich_010       2       0       0       0       0       0       0
## Saanich_100       0       2       0       0       2       0       0
## Saanich_120       0       0       0       0       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       2       2       0       0       2
##             Otu3424 Otu3425 Otu3426 Otu3427 Otu3428 Otu3429 Otu3430
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       2       2
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       2       2       2       2       0       0
##             Otu3431 Otu3432 Otu3433 Otu3434 Otu3435 Otu3436 Otu3437
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       2       2       0       0
## Saanich_135       0       0       0       0       0       0       2
## Saanich_150       2       2       2       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       2       0
##             Otu3438 Otu3439 Otu3440 Otu3441 Otu3442 Otu3443 Otu3444
## Saanich_010       0       0       0       0       0       0       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       2       0       0       0       2       0       0
## Saanich_135       0       0       0       0       0       2       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       2       0       2       0       0       0
## Saanich_200       0       0       2       0       0       0       0
##             Otu3445 Otu3446 Otu3447 Otu3448 Otu3449 Otu3450 Otu3451
## Saanich_010       2       2       0       0       0       0       0
## Saanich_100       0       0       0       0       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       2       0       0       0       0
## Saanich_200       0       0       0       2       0       0       0
##             Otu3452 Otu3453 Otu3454 Otu3455 Otu3456 Otu3457 Otu3458
## Saanich_010       0       0       0       0       2       2       2
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       0       2       2       2       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3459 Otu3460 Otu3461 Otu3462 Otu3463 Otu3464 Otu3465
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       2       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       2       2       2       2       2       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3466 Otu3467 Otu3468 Otu3469 Otu3470 Otu3471 Otu3472
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       2       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3473 Otu3474 Otu3475 Otu3476 Otu3477 Otu3478 Otu3479
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       0       0       0       0
## Saanich_120       0       0       0       2       2       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3480 Otu3481 Otu3482 Otu3483 Otu3484 Otu3485 Otu3486
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       2       2
## Saanich_120       2       2       2       2       2       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3487 Otu3488 Otu3489 Otu3490 Otu3491 Otu3492 Otu3493
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       2       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3494 Otu3495 Otu3496 Otu3497 Otu3498 Otu3499 Otu3500
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       2       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3501 Otu3502 Otu3503 Otu3504 Otu3505 Otu3506 Otu3507
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       0       0       0       0
## Saanich_120       0       0       0       2       2       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3508 Otu3509 Otu3510 Otu3511 Otu3512 Otu3513 Otu3514
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       2       2       2       2       2       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3515 Otu3516 Otu3517 Otu3518 Otu3519 Otu3520 Otu3521
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       2       2       0       0       0       0       0
## Saanich_135       0       0       2       2       2       2       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3522 Otu3523 Otu3524 Otu3525 Otu3526 Otu3527 Otu3528
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       2       2       2       2       2       2
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3529 Otu3530 Otu3531 Otu3532 Otu3533 Otu3534 Otu3535
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       2       2       2       2       2       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3536 Otu3537 Otu3538 Otu3539 Otu3540 Otu3541 Otu3542
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       2       2       2       2       2       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       0       0       0       0       0       0
##             Otu3543 Otu3544 Otu3545 Otu3546 Otu3547 Otu3548 Otu3549
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       2       2       2       2       2       2       2
## Saanich_200       0       0       0       0       0       0       0
##             Otu3550 Otu3551 Otu3552 Otu3553 Otu3554 Otu3555 Otu3556
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       2       0       0       0       0       0       0
## Saanich_200       0       2       2       2       2       2       2
##             Otu3557 Otu3558 Otu3559 Otu3560 Otu3561 Otu3562 Otu3563
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       2       2       2       2
## Saanich_200       2       2       2       0       0       0       0
##             Otu3564 Otu3565 Otu3566 Otu3567 Otu3568 Otu3569 Otu3570
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       2       2       2       2       2       2       2
## Saanich_200       0       0       0       0       0       0       0
##             Otu3571 Otu3572 Otu3573 Otu3574 Otu3575 Otu3576 Otu3577
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       2       2       2       2       2       2       2
## Saanich_200       0       0       0       0       0       0       0
##             Otu3578 Otu3579 Otu3580 Otu3581 Otu3582 Otu3583 Otu3584
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       2       0       0       0       0       0       0
## Saanich_200       0       2       2       2       2       2       2
##             Otu3585 Otu3586 Otu3587 Otu3588 Otu3589 Otu3590 Otu3591
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       2       2       2       2       2       2
##             Otu3592 Otu3593 Otu3594 Otu3595 Otu3596 Otu3597 Otu3598
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       2       2       2       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       2
##             Otu3599 Otu3600 Otu3601 Otu3602 Otu3603 Otu3604 Otu3605
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       2       2       2       2       2       2
##             Otu3606 Otu3607 Otu3608 Otu3609 Otu3610 Otu3611 Otu3612
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       2       2       2       2       2       2
##             Otu3613 Otu3614 Otu3615 Otu3616 Otu3617 Otu3618 Otu3619
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       2       2       2       2       2       2
##             Otu3620 Otu3621 Otu3622 Otu3623 Otu3624 Otu3625 Otu3626
## Saanich_010       0       0       0       0       2       2       2
## Saanich_100       0       0       2       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       2       0       0       0
## Saanich_200       2       2       0       0       0       0       0
##             Otu3627 Otu3628 Otu3629 Otu3630 Otu3631 Otu3632 Otu3633
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       2       2
## Saanich_120       0       0       2       0       0       0       0
## Saanich_135       0       0       0       2       0       0       0
## Saanich_150       0       2       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       0       0       0       2       0       0
##             Otu3634 Otu3635 Otu3636 Otu3637 Otu3638 Otu3639 Otu3640
## Saanich_010       2       0       0       0       2       2       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       2       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       2       2       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3641 Otu3642 Otu3643 Otu3644 Otu3645 Otu3646 Otu3647
## Saanich_010       2       2       2       0       0       0       0
## Saanich_100       0       0       0       0       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       2       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3648 Otu3649 Otu3650 Otu3651 Otu3652 Otu3653 Otu3654
## Saanich_010       0       0       0       0       0       0       2
## Saanich_100       0       0       2       2       0       0       0
## Saanich_120       0       0       0       0       2       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       2       0       0       0       0       0
## Saanich_165       0       0       0       0       0       2       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3655 Otu3656 Otu3657 Otu3658 Otu3659 Otu3660 Otu3661
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       2       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       2       2       0       2       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       2       0       2       0       2
## Saanich_200       0       0       0       0       0       0       0
##             Otu3662 Otu3663 Otu3664 Otu3665 Otu3666 Otu3667 Otu3668
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       2       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       2       0       0       0
## Saanich_165       0       2       2       0       0       0       2
## Saanich_200       2       0       0       0       0       0       0
##             Otu3669 Otu3670 Otu3671 Otu3672 Otu3673 Otu3674 Otu3675
## Saanich_010       0       0       0       0       2       2       2
## Saanich_100       0       0       0       2       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       2       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       2       0       0       0       0       0       0
## Saanich_200       0       2       0       0       0       0       0
##             Otu3676 Otu3677 Otu3678 Otu3679 Otu3680 Otu3681 Otu3682
## Saanich_010       0       2       0       0       0       0       2
## Saanich_100       0       0       2       2       2       2       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       0       0       0       0       0       0
##             Otu3683 Otu3684 Otu3685 Otu3686 Otu3687 Otu3688 Otu3689
## Saanich_010       0       0       2       0       2       2       2
## Saanich_100       2       2       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       2       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3690 Otu3691 Otu3692 Otu3693 Otu3694 Otu3695 Otu3696
## Saanich_010       0       2       0       2       2       2       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       2       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3697 Otu3698 Otu3699 Otu3700 Otu3701 Otu3702 Otu3703
## Saanich_010       2       2       2       2       2       2       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3704 Otu3705 Otu3706 Otu3707 Otu3708 Otu3709 Otu3710
## Saanich_010       2       2       2       2       2       2       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3711 Otu3712 Otu3713 Otu3714 Otu3715 Otu3716 Otu3717
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       2       2       2       0       0       0       0
## Saanich_150       0       0       0       2       2       2       2
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3718 Otu3719 Otu3720 Otu3721 Otu3722 Otu3723 Otu3724
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       2       2       2       2       2       2
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3725 Otu3726 Otu3727 Otu3728 Otu3729 Otu3730 Otu3731
## Saanich_010       0       0       0       0       0       2       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       2       2       2       2       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3732 Otu3733 Otu3734 Otu3735 Otu3736 Otu3737 Otu3738
## Saanich_010       2       2       2       0       0       0       0
## Saanich_100       0       0       0       2       2       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       2       0
## Saanich_150       0       0       0       0       0       0       2
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3739 Otu3740 Otu3741 Otu3742 Otu3743 Otu3744 Otu3745
## Saanich_010       0       2       0       0       0       0       2
## Saanich_100       2       0       0       0       2       0       0
## Saanich_120       0       0       0       0       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       2       2       0       0       0
##             Otu3746 Otu3747 Otu3748 Otu3749 Otu3750 Otu3751 Otu3752
## Saanich_010       0       2       2       2       2       2       2
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3753 Otu3754 Otu3755 Otu3756 Otu3757 Otu3758 Otu3759
## Saanich_010       2       2       2       2       2       2       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3760 Otu3761 Otu3762 Otu3763 Otu3764 Otu3765 Otu3766
## Saanich_010       2       2       2       2       2       2       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3767 Otu3768 Otu3769 Otu3770 Otu3771 Otu3772 Otu3773
## Saanich_010       2       0       2       2       0       0       2
## Saanich_100       0       0       0       0       2       2       0
## Saanich_120       0       2       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3774 Otu3775 Otu3776 Otu3777 Otu3778 Otu3779 Otu3780
## Saanich_010       0       2       2       0       0       0       0
## Saanich_100       2       0       0       0       0       2       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       2       0       0
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       0       0       2       0       0       0
##             Otu3781 Otu3782 Otu3783 Otu3784 Otu3785 Otu3786 Otu3787
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       2       0       2       2       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       2       2
## Saanich_200       2       0       2       0       0       0       0
##             Otu3788 Otu3789 Otu3790 Otu3791 Otu3792 Otu3793 Otu3794
## Saanich_010       0       0       0       2       2       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       2       0
## Saanich_135       0       0       0       0       0       0       2
## Saanich_150       0       2       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       0       2       0       0       0       0
##             Otu3795 Otu3796 Otu3797 Otu3798 Otu3799 Otu3800 Otu3801
## Saanich_010       0       2       2       0       0       0       0
## Saanich_100       0       0       0       0       0       2       0
## Saanich_120       2       0       0       2       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       2       0       0
##             Otu3802 Otu3803 Otu3804 Otu3805 Otu3806 Otu3807 Otu3808
## Saanich_010       0       0       2       2       2       2       2
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3809 Otu3810 Otu3811 Otu3812 Otu3813 Otu3814 Otu3815
## Saanich_010       2       2       2       2       0       2       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       2       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3816 Otu3817 Otu3818 Otu3819 Otu3820 Otu3821 Otu3822
## Saanich_010       2       2       2       2       2       2       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3823 Otu3824 Otu3825 Otu3826 Otu3827 Otu3828 Otu3829
## Saanich_010       2       0       2       2       0       2       2
## Saanich_100       0       0       0       0       2       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3830 Otu3831 Otu3832 Otu3833 Otu3834 Otu3835 Otu3836
## Saanich_010       2       2       2       2       2       0       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       2       0
##             Otu3837 Otu3838 Otu3839 Otu3840 Otu3841 Otu3842 Otu3843
## Saanich_010       2       2       2       2       2       2       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       2
##             Otu3844 Otu3845 Otu3846 Otu3847 Otu3848 Otu3849 Otu3850
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       0       0       2       0       0       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       0       0       2       0       2       2       0
##             Otu3851 Otu3852 Otu3853 Otu3854 Otu3855 Otu3856 Otu3857
## Saanich_010       0       2       2       0       0       0       0
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       2       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       2       2       2
##             Otu3858 Otu3859 Otu3860 Otu3861 Otu3862 Otu3863 Otu3864
## Saanich_010       0       0       2       2       2       0       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       2       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       0       0       0       0       2       0
##             Otu3865 Otu3866 Otu3867 Otu3868 Otu3869 Otu3870 Otu3871
## Saanich_010       2       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       2       2       2       2       2       2
##             Otu3872 Otu3873 Otu3874 Otu3875 Otu3876 Otu3877 Otu3878
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       2       2       2       2       2       2
##             Otu3879 Otu3880 Otu3881 Otu3882 Otu3883 Otu3884 Otu3885
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       2       2       2       0
## Saanich_120       0       0       0       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       0       0       0       0       0       0
##             Otu3886 Otu3887 Otu3888 Otu3889 Otu3890 Otu3891 Otu3892
## Saanich_010       0       2       0       0       0       0       0
## Saanich_100       0       0       2       2       0       0       0
## Saanich_120       2       0       0       0       2       2       0
## Saanich_135       0       0       0       0       0       0       2
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3893 Otu3894 Otu3895 Otu3896 Otu3897 Otu3898 Otu3899
## Saanich_010       0       2       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       2
## Saanich_120       0       0       2       0       0       0       0
## Saanich_135       2       0       0       0       0       2       0
## Saanich_150       0       0       0       2       2       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3900 Otu3901 Otu3902 Otu3903 Otu3904 Otu3905 Otu3906
## Saanich_010       0       0       2       0       0       2       2
## Saanich_100       2       0       0       2       2       0       0
## Saanich_120       0       2       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3907 Otu3908 Otu3909 Otu3910 Otu3911 Otu3912 Otu3913
## Saanich_010       0       0       0       0       0       0       2
## Saanich_100       0       2       2       0       0       0       0
## Saanich_120       2       0       0       2       0       0       0
## Saanich_135       0       0       0       0       2       2       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3914 Otu3915 Otu3916 Otu3917 Otu3918 Otu3919 Otu3920
## Saanich_010       2       0       0       0       0       0       0
## Saanich_100       0       2       2       2       0       0       0
## Saanich_120       0       0       0       0       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       2       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       2
##             Otu3921 Otu3922 Otu3923 Otu3924 Otu3925 Otu3926 Otu3927
## Saanich_010       0       2       0       2       0       0       0
## Saanich_100       0       0       0       0       0       2       2
## Saanich_120       0       0       0       0       2       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       0       2       0       0       0       0
##             Otu3928 Otu3929 Otu3930 Otu3931 Otu3932 Otu3933 Otu3934
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       0       0       0       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       2       0       0       2       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       2       2       0       2       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3935 Otu3936 Otu3937 Otu3938 Otu3939 Otu3940 Otu3941
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       0       0       0       0       0
## Saanich_120       0       0       0       0       2       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       2       0       0       0
## Saanich_200       2       0       2       0       0       0       0
##             Otu3942 Otu3943 Otu3944 Otu3945 Otu3946 Otu3947 Otu3948
## Saanich_010       0       0       0       0       0       0       2
## Saanich_100       0       0       0       2       2       0       0
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       2       0
## Saanich_165       0       0       2       0       0       0       0
## Saanich_200       0       2       0       0       0       0       0
##             Otu3949 Otu3950 Otu3951 Otu3952 Otu3953 Otu3954 Otu3955
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       2       2       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       2       0       0       2       2       0
##             Otu3956 Otu3957 Otu3958 Otu3959 Otu3960 Otu3961 Otu3962
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       2       0       0
## Saanich_165       0       0       0       2       0       0       2
## Saanich_200       0       0       2       0       0       2       0
##             Otu3963 Otu3964 Otu3965 Otu3966 Otu3967 Otu3968 Otu3969
## Saanich_010       0       2       2       0       0       0       0
## Saanich_100       0       0       0       0       2       0       0
## Saanich_120       0       0       0       2       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       2       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       2
##             Otu3970 Otu3971 Otu3972 Otu3973 Otu3974 Otu3975 Otu3976
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       0       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       2       2       2       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3977 Otu3978 Otu3979 Otu3980 Otu3981 Otu3982 Otu3983
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       2       2       2       2
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3984 Otu3985 Otu3986 Otu3987 Otu3988 Otu3989 Otu3990
## Saanich_010       0       0       0       0       0       2       0
## Saanich_100       2       2       2       2       0       0       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       2       0       0
##             Otu3991 Otu3992 Otu3993 Otu3994 Otu3995 Otu3996 Otu3997
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       0       0       2       0       0
## Saanich_120       0       0       2       2       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       2
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu3998 Otu3999 Otu4000 Otu4001 Otu4002 Otu4003 Otu4004
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       2       0       0       0
## Saanich_120       0       0       0       0       2       0       0
## Saanich_135       2       2       0       0       0       0       2
## Saanich_150       0       0       2       0       0       0       0
## Saanich_165       0       0       0       0       0       2       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4005 Otu4006 Otu4007 Otu4008 Otu4009 Otu4010 Otu4011
## Saanich_010       0       2       0       0       0       2       2
## Saanich_100       0       0       2       0       0       0       0
## Saanich_120       0       0       0       0       2       0       0
## Saanich_135       0       0       0       2       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       0       0       0       0       0       0
##             Otu4012 Otu4013 Otu4014 Otu4015 Otu4016 Otu4017 Otu4018
## Saanich_010       2       2       0       2       2       2       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       2       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4019 Otu4020 Otu4021 Otu4022 Otu4023 Otu4024 Otu4025
## Saanich_010       2       2       2       2       2       2       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4026 Otu4027 Otu4028 Otu4029 Otu4030 Otu4031 Otu4032
## Saanich_010       2       2       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       2       2       2       2       2
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4033 Otu4034 Otu4035 Otu4036 Otu4037 Otu4038 Otu4039
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       2       2       2       0       0
## Saanich_135       0       0       0       0       0       2       0
## Saanich_150       0       0       0       0       0       0       2
## Saanich_165       2       2       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4040 Otu4041 Otu4042 Otu4043 Otu4044 Otu4045 Otu4046
## Saanich_010       0       0       0       0       2       0       0
## Saanich_100       0       0       0       0       0       2       0
## Saanich_120       0       0       0       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       2       0       0       2       0       0       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       0       0       2       0       0       0       0
##             Otu4047 Otu4048 Otu4049 Otu4050 Otu4051 Otu4052 Otu4053
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       2       2       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       2       0       0       0       2       2       0
##             Otu4054 Otu4055 Otu4056 Otu4057 Otu4058 Otu4059 Otu4060
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       2       0       0       0       0
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       2       0       0       2       2       2
## Saanich_200       0       0       0       2       0       0       0
##             Otu4061 Otu4062 Otu4063 Otu4064 Otu4065 Otu4066 Otu4067
## Saanich_010       0       0       2       2       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       2       0       0       2       2       2
## Saanich_135       2       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4068 Otu4069 Otu4070 Otu4071 Otu4072 Otu4073 Otu4074
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       0       0       2       0
## Saanich_120       0       2       2       2       0       0       0
## Saanich_135       0       0       0       0       0       0       2
## Saanich_150       0       0       0       0       2       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4075 Otu4076 Otu4077 Otu4078 Otu4079 Otu4080 Otu4081
## Saanich_010       2       2       0       0       0       0       0
## Saanich_100       0       0       2       2       2       0       0
## Saanich_120       0       0       0       0       0       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4082 Otu4083 Otu4084 Otu4085 Otu4086 Otu4087 Otu4088
## Saanich_010       0       2       0       0       0       0       0
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       0       0       2       2       0       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       2       0       0
##             Otu4089 Otu4090 Otu4091 Otu4092 Otu4093 Otu4094 Otu4095
## Saanich_010       0       0       2       2       0       0       0
## Saanich_100       0       2       0       0       2       2       2
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4096 Otu4097 Otu4098 Otu4099 Otu4100 Otu4101 Otu4102
## Saanich_010       0       0       0       0       0       2       2
## Saanich_100       0       0       0       2       0       0       0
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       2       2       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       2       0       0
##             Otu4103 Otu4104 Otu4105 Otu4106 Otu4107 Otu4108 Otu4109
## Saanich_010       2       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       2
## Saanich_120       0       0       2       0       2       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       2       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       2       0       0       0       0       0
##             Otu4110 Otu4111 Otu4112 Otu4113 Otu4114 Otu4115 Otu4116
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       2       0       0       0       0
## Saanich_150       0       2       0       0       0       2       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       2       2       0       2
##             Otu4117 Otu4118 Otu4119 Otu4120 Otu4121 Otu4122 Otu4123
## Saanich_010       0       2       0       2       2       2       2
## Saanich_100       0       0       2       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       2       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4124 Otu4125 Otu4126 Otu4127 Otu4128 Otu4129 Otu4130
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       2       2       2       2       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       0       0       0       0       0       0
##             Otu4131 Otu4132 Otu4133 Otu4134 Otu4135 Otu4136 Otu4137
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       2       2       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4138 Otu4139 Otu4140 Otu4141 Otu4142 Otu4143 Otu4144
## Saanich_010       0       0       0       0       0       2       2
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       2       2       2       2       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4145 Otu4146 Otu4147 Otu4148 Otu4149 Otu4150 Otu4151
## Saanich_010       2       0       0       0       0       0       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       2       2       0       0       2       0
## Saanich_135       0       0       0       2       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       2       0       0
##             Otu4152 Otu4153 Otu4154 Otu4155 Otu4156 Otu4157 Otu4158
## Saanich_010       2       2       2       0       2       2       2
## Saanich_100       0       0       0       2       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4159 Otu4160 Otu4161 Otu4162 Otu4163 Otu4164 Otu4165
## Saanich_010       2       2       0       2       2       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       2       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       2       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4166 Otu4167 Otu4168 Otu4169 Otu4170 Otu4171 Otu4172
## Saanich_010       2       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       2
## Saanich_120       0       2       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       2       2       2       2       0
##             Otu4173 Otu4174 Otu4175 Otu4176 Otu4177 Otu4178 Otu4179
## Saanich_010       2       0       0       0       0       2       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       2       2       2       0       0
## Saanich_200       0       2       0       0       0       0       0
##             Otu4180 Otu4181 Otu4182 Otu4183 Otu4184 Otu4185 Otu4186
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       2       0       0       0       0
## Saanich_165       2       2       0       2       0       2       2
## Saanich_200       0       0       0       0       2       0       0
##             Otu4187 Otu4188 Otu4189 Otu4190 Otu4191 Otu4192 Otu4193
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       2       2       0
## Saanich_120       0       0       0       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       2       0       0       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       2       0       2       0       0       0       0
##             Otu4194 Otu4195 Otu4196 Otu4197 Otu4198 Otu4199 Otu4200
## Saanich_010       0       0       2       0       0       0       2
## Saanich_100       0       0       0       0       0       2       0
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       2       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       2       2       0       0
##             Otu4201 Otu4202 Otu4203 Otu4204 Otu4205 Otu4206 Otu4207
## Saanich_010       2       2       2       2       2       2       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4208 Otu4209 Otu4210 Otu4211 Otu4212 Otu4213 Otu4214
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       2       2       0       0       0
## Saanich_200       2       2       0       0       0       2       2
##             Otu4215 Otu4216 Otu4217 Otu4218 Otu4219 Otu4220 Otu4221
## Saanich_010       0       0       0       2       2       2       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       2       0       0       0       0
## Saanich_165       2       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4222 Otu4223 Otu4224 Otu4225 Otu4226 Otu4227 Otu4228
## Saanich_010       2       2       2       0       2       2       2
## Saanich_100       0       0       0       2       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4229 Otu4230 Otu4231 Otu4232 Otu4233 Otu4234 Otu4235
## Saanich_010       2       2       2       2       0       0       0
## Saanich_100       0       0       0       0       0       0       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       2       2       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4236 Otu4237 Otu4238 Otu4239 Otu4240 Otu4241 Otu4242
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       2       0       0       0       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       2       2       2       2       0       0
##             Otu4243 Otu4244 Otu4245 Otu4246 Otu4247 Otu4248 Otu4249
## Saanich_010       0       0       2       2       2       2       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       2       0       0       0       0       0
##             Otu4250 Otu4251 Otu4252 Otu4253 Otu4254 Otu4255 Otu4256
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       0       0       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       2       0       0       0       0       0
## Saanich_150       0       0       2       2       2       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4257 Otu4258 Otu4259 Otu4260 Otu4261 Otu4262 Otu4263
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       0       2       2       2       0
## Saanich_120       0       2       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       2       0       0       0       2
##             Otu4264 Otu4265 Otu4266 Otu4267 Otu4268 Otu4269 Otu4270
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       2       2       2       2       2       2       2
## Saanich_200       0       0       0       0       0       0       0
##             Otu4271 Otu4272 Otu4273 Otu4274 Otu4275 Otu4276 Otu4277
## Saanich_010       2       2       2       0       2       0       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       2       0       2       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4278 Otu4279 Otu4280 Otu4281 Otu4282 Otu4283 Otu4284
## Saanich_010       2       2       0       0       0       2       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       2       0       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       2       2       0       0
##             Otu4285 Otu4286 Otu4287 Otu4288 Otu4289 Otu4290 Otu4291
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       2       2       2       2       2       2
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       0       0       0       0       0       0
##             Otu4292 Otu4293 Otu4294 Otu4295 Otu4296 Otu4297 Otu4298
## Saanich_010       2       0       2       2       2       0       0
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       2       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       2
## Saanich_200       0       0       0       0       0       2       0
##             Otu4299 Otu4300 Otu4301 Otu4302 Otu4303 Otu4304 Otu4305
## Saanich_010       0       0       0       0       0       2       2
## Saanich_100       0       0       0       0       2       0       0
## Saanich_120       0       0       2       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       2       0       0       0       0       0
## Saanich_200       2       0       0       2       0       0       0
##             Otu4306 Otu4307 Otu4308 Otu4309 Otu4310 Otu4311 Otu4312
## Saanich_010       0       2       2       2       2       0       2
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       2       0
##             Otu4313 Otu4314 Otu4315 Otu4316 Otu4317 Otu4318 Otu4319
## Saanich_010       0       2       0       0       0       0       2
## Saanich_100       0       0       0       2       0       2       0
## Saanich_120       2       0       0       0       0       0       0
## Saanich_135       0       0       0       0       2       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       2       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4320 Otu4321 Otu4322 Otu4323 Otu4324 Otu4325 Otu4326
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       2       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       2       0       0       0
## Saanich_150       0       0       2       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       2       2       2
##             Otu4327 Otu4328 Otu4329 Otu4330 Otu4331 Otu4332 Otu4333
## Saanich_010       0       2       2       2       0       0       2
## Saanich_100       0       0       0       0       2       2       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       2       0       0       0       0       0       0
##             Otu4334 Otu4335 Otu4336 Otu4337 Otu4338 Otu4339 Otu4340
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       2       0       2       0       0       0       0
## Saanich_120       0       2       0       2       2       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       2       2
##             Otu4341 Otu4342 Otu4343 Otu4344 Otu4345 Otu4346 Otu4347
## Saanich_010       0       0       0       0       0       0       0
## Saanich_100       0       0       2       0       0       2       0
## Saanich_120       0       0       0       2       0       0       2
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       2       0       0
## Saanich_200       2       2       0       0       0       0       0
##             Otu4348 Otu4349 Otu4350 Otu4351 Otu4352 Otu4353 Otu4354
## Saanich_010       0       0       0       2       2       2       2
## Saanich_100       2       2       2       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4355 Otu4356 Otu4357 Otu4358 Otu4359 Otu4360 Otu4361
## Saanich_010       2       2       2       2       2       2       2
## Saanich_100       0       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
##             Otu4362 Otu4363 Otu4364 Otu4365 Otu4366 Otu4367 Otu4368
## Saanich_010       0       2       2       2       2       2       2
## Saanich_100       2       0       0       0       0       0       0
## Saanich_120       0       0       0       0       0       0       0
## Saanich_135       0       0       0       0       0       0       0
## Saanich_150       0       0       0       0       0       0       0
## Saanich_165       0       0       0       0       0       0       0
## Saanich_200       0       0       0       0       0       0       0
OTU = read.table(file="Saanich.OTU.txt", header=TRUE, row.names=1, sep="\t")

Exercise 2 - Selecting data

library(dplyr)

read.table(file="Saanich.metadata.txt", header=TRUE, row.names=1, sep="\t", na.strings=c("NAN", "NA", "."))
##              Depth_m   O2_uM PO4_uM SiO2_uM NO3_uM NH4_uM Std_NH4_uM
## SI072_S3_010      10 216.667  0.520  20.672  1.793 0.4080     0.0084
## SI072_S3_020      20 159.672  1.817  32.888 13.736 2.6551     0.0044
## SI072_S3_040      40 141.778  2.244  38.980 22.013 1.3007     0.0087
## SI072_S3_060      60  97.894  2.598  47.335 28.434 0.2652     0.0047
## SI072_S3_075      75  44.978  3.190  60.986 30.604 0.1281     0.0227
## SI072_S3_085      85  25.807  3.745  70.963 28.731 0.1780     0.0070
## SI072_S3_090      90  27.011  3.934  67.897 26.780 0.1307     0.0054
## SI072_S3_097      97  34.436  3.942  67.645 26.248 0.1371     0.0061
## SI072_S3_100     100  38.012  3.672  69.062 26.400 0.1344     0.0092
## SI072_S3_110     110  27.557  3.965  69.577 24.355 0.1046     0.0252
## SI072_S3_120     120  32.354  4.090  64.383 21.302 0.1782     0.0100
## SI072_S3_135     135  20.446  4.342  70.321 15.917 0.1296     0.0166
## SI072_S3_150     150   0.000  4.988  70.780  5.278 2.1754     0.0293
## SI072_S3_165     165   0.000  5.599  62.580  0.000 4.7095     0.2112
## SI072_S3_185     185   0.000  5.974  64.763  0.000 6.4038     0.4384
## SI072_S3_200     200   0.000  6.298  66.200  0.000 7.3582     0.2816
##              NO2_uM Std_NO2_uM  H2S_uM Std_H2S_uM Cells.ml N2O_nM
## SI072_S3_010 0.1275     0.0088  0.0000     0.0000       NA  0.849
## SI072_S3_020 0.4938     0.0017  0.0000     0.0000       NA 13.199
## SI072_S3_040 0.3775     0.0052  0.0000     0.0000       NA 12.829
## SI072_S3_060 0.0471     0.0245  0.0000     0.0000       NA 12.306
## SI072_S3_075 0.0532     0.0052  0.0000     0.0000       NA 13.896
## SI072_S3_085 0.0966     0.0105  0.0000     0.0000       NA 12.959
## SI072_S3_090 0.0186     0.0192  0.0000     0.0000       NA 15.551
## SI072_S3_097 0.0297     0.0105  0.0000     0.0000       NA 18.682
## SI072_S3_100 0.0817     0.0105  0.0000     0.0000       NA 18.087
## SI072_S3_110 0.0619     0.0105  0.0000     0.0000       NA 15.843
## SI072_S3_120 0.0978     0.0018  0.0000     0.0000       NA 16.304
## SI072_S3_135 0.0706     0.0018  0.0000     0.0000       NA 12.909
## SI072_S3_150 0.1127     0.0018  0.0000     0.0000       NA 11.815
## SI072_S3_165 0.0805     0.0053  3.5027     0.0423       NA  6.310
## SI072_S3_185 0.0211     0.0158 11.6470     0.0827       NA  0.000
## SI072_S3_200 0.0000     0.0000 17.9867     0.0006       NA  0.000
##              Std_N2O_nM   CH4_nM Std_CH4_nM Temperature_C
## SI072_S3_010      0.114 1030.478      3.070        12.854
## SI072_S3_020      0.000   29.012      0.000        11.005
## SI072_S3_040      1.509   37.146      2.695         9.536
## SI072_S3_060      0.524   36.501      3.521         8.540
## SI072_S3_075      1.417   24.013      0.435         8.480
## SI072_S3_085      0.955    7.376      0.029         8.538
## SI072_S3_090      1.417    4.190      0.159         8.599
## SI072_S3_097      1.628    3.991      0.759         8.647
## SI072_S3_100      1.275    3.231      0.392         8.703
## SI072_S3_110      1.953    3.633      0.127         8.727
## SI072_S3_120      1.085    3.463      0.519         8.796
## SI072_S3_135      2.577    4.815      0.658         8.882
## SI072_S3_150      0.000    8.323      0.000         9.002
## SI072_S3_165      0.732   23.831      2.291         9.041
## SI072_S3_185      0.000  310.068      0.000         9.091
## SI072_S3_200      0.000  774.034     12.745         9.117
##              Conductivity_mScm_1 Fluorescence_mgm_3 OxygenSBE_V
## SI072_S3_010              33.534              3.521       4.954
## SI072_S3_020              32.731              0.207       3.654
## SI072_S3_040              32.149              0.157       3.246
## SI072_S3_060              32.090              0.099       2.243
## SI072_S3_075              32.465              0.171       1.031
## SI072_S3_085              32.704              0.167       0.592
## SI072_S3_090              32.812              0.115       0.619
## SI072_S3_097              32.890              0.087       0.790
## SI072_S3_100              32.970              0.109       0.872
## SI072_S3_110              33.053              0.179       0.632
## SI072_S3_120              33.188              0.197       0.742
## SI072_S3_135              33.345              0.108       0.469
## SI072_S3_150              33.526              0.181       0.089
## SI072_S3_165              33.597              0.132       0.069
## SI072_S3_185              33.681              0.199       0.066
## SI072_S3_200              33.727              0.236       0.063
##              Salinity_PSU Density_q
## SI072_S3_010       28.121    21.098
## SI072_S3_020       28.763    21.923
## SI072_S3_040       29.352    22.619
## SI072_S3_060       30.115    23.365
## SI072_S3_075       30.551    23.714
## SI072_S3_085       30.745    23.858
## SI072_S3_090       30.803    23.895
## SI072_S3_097       30.838    23.915
## SI072_S3_100       30.872    23.933
## SI072_S3_110       30.932    23.977
## SI072_S3_120       31.007    24.026
## SI072_S3_135       31.088    24.076
## SI072_S3_150       31.164    24.118
## SI072_S3_165       31.197    24.138
## SI072_S3_185       31.231    24.157
## SI072_S3_200       31.248    24.167
metadata = read.table(file="Saanich.metadata.txt", header=TRUE, row.names=1, sep="\t")

filter(metadata, CH4_nM > 100 & Temperature_C < 10) %>%
  select(Depth_m, Temperature_C, CH4_nM)
##   Depth_m Temperature_C  CH4_nM
## 1     185         9.091 310.068
## 2     200         9.117 774.034

Exercise 2 - Mutating data

library(dplyr)

metadata = read.table(file="Saanich.metadata.txt", header=TRUE, row.names=1, sep="\t")

select(metadata, ends_with("nM")) %>%
  mutate(N2O_uM = N2O_nM/1000) %>%
  mutate(Std_N2O_uM = Std_N2O_nM/1000) %>%
  mutate(CH4_uM = CH4_nM/1000) %>%
  mutate(Std_CH4_uM = Std_CH4_nM/1000) 
##    N2O_nM Std_N2O_nM   CH4_nM Std_CH4_nM   N2O_uM Std_N2O_uM   CH4_uM
## 1   0.849      0.114 1030.478      3.070 0.000849   0.000114 1.030478
## 2  13.199      0.000   29.012      0.000 0.013199   0.000000 0.029012
## 3  12.829      1.509   37.146      2.695 0.012829   0.001509 0.037146
## 4  12.306      0.524   36.501      3.521 0.012306   0.000524 0.036501
## 5  13.896      1.417   24.013      0.435 0.013896   0.001417 0.024013
## 6  12.959      0.955    7.376      0.029 0.012959   0.000955 0.007376
## 7  15.551      1.417    4.190      0.159 0.015551   0.001417 0.004190
## 8  18.682      1.628    3.991      0.759 0.018682   0.001628 0.003991
## 9  18.087      1.275    3.231      0.392 0.018087   0.001275 0.003231
## 10 15.843      1.953    3.633      0.127 0.015843   0.001953 0.003633
## 11 16.304      1.085    3.463      0.519 0.016304   0.001085 0.003463
## 12 12.909      2.577    4.815      0.658 0.012909   0.002577 0.004815
## 13 11.815      0.000    8.323      0.000 0.011815   0.000000 0.008323
## 14  6.310      0.732   23.831      2.291 0.006310   0.000732 0.023831
## 15  0.000      0.000  310.068      0.000 0.000000   0.000000 0.310068
## 16  0.000      0.000  774.034     12.745 0.000000   0.000000 0.774034
##    Std_CH4_uM
## 1    0.003070
## 2    0.000000
## 3    0.002695
## 4    0.003521
## 5    0.000435
## 6    0.000029
## 7    0.000159
## 8    0.000759
## 9    0.000392
## 10   0.000127
## 11   0.000519
## 12   0.000658
## 13   0.000000
## 14   0.002291
## 15   0.000000
## 16   0.012745

Data Science Friday 5 - Plotting Data

library(tidyverse)

Exercise 1 - Plotting with ggplot

library(readr)
library(phyloseq)
library(ggplot2)
library(dplyr)
library(knitr)

ggplot(metadata, aes(x=NH4_uM, y=Depth_m)) +
  geom_point(color="purple", shape=17)

Exercise 2 - Plotting with ggplot and dplyr

select(metadata, Temperature_C, Depth_m) %>% 
  mutate(Temperature_F = (Temperature_C * (9/5)+32))
##    Temperature_C Depth_m Temperature_F
## 1         12.854      10       55.1372
## 2         11.005      20       51.8090
## 3          9.536      40       49.1648
## 4          8.540      60       47.3720
## 5          8.480      75       47.2640
## 6          8.538      85       47.3684
## 7          8.599      90       47.4782
## 8          8.647      97       47.5646
## 9          8.703     100       47.6654
## 10         8.727     110       47.7086
## 11         8.796     120       47.8328
## 12         8.882     135       47.9876
## 13         9.002     150       48.2036
## 14         9.041     165       48.2738
## 15         9.091     185       48.3638
## 16         9.117     200       48.4106
ex2 = select(metadata, Temperature_C, Depth_m) %>% 
  mutate(Temperature_F = (Temperature_C * (9/5)+32))

ggplot(ex2, aes(x=Temperature_F, y=Depth_m)) +
  geom_point()

Exercise 3 - Plotting with ggplot and phyloseq

load(file="physeq.RData")
physeq_percent = transform_sample_counts(physeq, function(x) 100 * x/sum(x))
plot_bar(physeq_percent, fill="Order") +
    geom_bar(aes(fill=Order), stat="identity") +
  ggtitle("Saanich Inlet Taxonomic Abundance (10-200m)") +
  xlab("Depth of Sample") 

Exercise 4 - Faceting

ex4 = select(metadata, ends_with("uM"), Depth_m)

facet = gather(metadata, key = "Nutrient", value = "uM", ends_with("uM"))

ggplot(facet, aes(x=Depth_m, y=uM))+
  geom_line()+
  geom_point()+
  facet_wrap(~Nutrient, scales="free_y") +
  theme(legend.position="none")

Writing Assignment 1

Spaceship Earth, A Human-Driven, Microbe-Powered Vessel

Introduction

Just how dependent is the human race on the global microbiome for our survival and how well can these microbes fare in the absence of humans? In this paper, I will address the statement: “Microbial life can easily live without us; we, however, cannot survive without the global catalysis and environmental transformations it provides.” and present arguments as to why I agree with this statement and provide evidence in which to support my case. It is important to delineate the purpose behind this assessment and the implications of the decision to support or refute this statement. Since the birth of humankind, we see the footprints of our species’ ability to significantly impact our environment, as evident with the global disappearance of megafauna following over-hunting by early humans (Schrag, 2012). This impact only grew with the invention of agriculture and the later, the Industrial Revolution. We are currently facing a great challenge to ensure the preservation of life on planet Earth as we know it. To accomplish this monumental task, the questions we need to ask in context to the prompt are: How dependent are humans on microbial engines for biogeochemical cycling and environmental transformations? How will microbes respond to these changes and can they fix the problems we have caused? Can us humans prevent the impending catastrophic changes to our planet with our technology alone, or will we need the aid of microbial systems? In this discussion, I will attempt to answer these questions and contemplate our place in the grand scheme of the global ecosystem.

Microbial Engines in Global Elemental Recycling

In the current biosphere, us humans, and indeed all living organisms, depend on the intricate biogeochemical networks and cycling mediated by microbial communities. As stated by Falkowski et al (2008), the geophysical processes and acid-base chemistry that shaped the abiotic world created niches in which microbes quickly filled, evolving to catalyze the redox reactions that molded the elemental cycles that exist today. Without these microbial systems, it is unlikely that life on Earth, including that of humans, will persist. We will focus on the carbon and the nitrogen cycle to illustrate this point.

Carbon is an essential element, making up the structures that form the critical molecules of life, including plasma membrane lipids, the sugars in nucleic acids and the backbone structures of amino acids used to make proteins. The most influential role of microbes in the carbon cycle is their fixation of CO2 via photosynthesis. Net primary production of phytoplankton is approximately 50% of the global number, with the remaining 50% achieved by land plants (Longhurst et al, 1995), indicating that microbes are an integral component of the carbon cycle. This also has major implications on the influx of energy into the food web, as heterotrophic microbes and higher eukaryotes depend on his autotrophic transformation of light energy into chemical energy. Also, many organisms directly rely on our oxygen-rich atmosphere for the catabolism of dietary molecules. Besides the explosion of oxygenic photosynthesis by cyanobacteria at around 2.7 Gyr that created the current atmospheric makeup, we also have microbes to thank for the maintenance of the atmospheric oxygen concentration. The marine autotroph Prochlorococcus is likely to be the most abundant genus in the biosphere and accounts for between 13-48% of the global oxygen production (Johnson et al, 2006). Another 30-60% of the global oxygen is produced by single-celled marine algae. Hence we humans, as organisms dependent on oxidative phosphorylation and therefore, oxygen as a terminal electron acceptor for respiration, are at the mercy of microbial carbon fixation and oxygen production through photosynthesis.

Nitrogen is another essential component of life and is a key element in amino acids and nucleic acid bases. As nitrogen gas is inherently inert, catalytically breaking the triple bond between the two N atoms requires a large activation energy barrier to be overcome (Canfield et al, 2010). The nitrogenase enzyme has evolved for exactly that task and quickly spread via horizontal gene transfer between prokaryotes and archaea. Almost all biotic N-fixation into ammonium (NH4+) is dependent on bacteria and archaea in terrestrial and marine ecosystems. This constitutes to around 55% of the total N-fixation, with the remaining nitrogen being fixed by anthropogenic processes such as the Haber-Bosch process and in legume farming. While some eukaryotes can fix nitrogen (and it is only because of symbiotic nitrogenase-expressing bacteria!), this quantity is negligible compared to the aforementioned amount. Further along in the cycle, various bacteria oxidize ammonium into nitrite (NO2-) and nitrate (NO3-) to be used as terminal electron acceptors in respiration. Plants are heavily dependent on these species for their source of nitrogen. On the other end of the cycle, fixed nitrogen must return to the atmosphere as N2 gas. This is accomplished by denitrification and anammox reactions. Anoxic denitrification is highly conserved and is the bacteria and archaea and can also be found in some protozoa and fungi. By contrast, we humans contribute essentially nothing to the return of nitrogen to the atmosphere! We will return to the N-cycle in the final section of this paper, where human implications will be discussed.

Microbial Resilience

Rough estimates place the grand total of all prokaryotes at 3.8x1030 cells (Whitman, Coleman, Wiebe, 1998). Although there are limitations to the estimation techniques and, with that, a mild degree of error, this number is staggering. The total carbon in prokaryotes can be estimated with more accuracy. At a total of 350-550x1015g of carbon, prokaryotes make up a massive reservoir of organic carbon, between 60-100% of the total plant carbon content (Whitman, Coleman, Wiebe, 1998). Even more impressive is that soil prokaryotes contain cumulatively more nitrogen than all land plants (Whitman, Coleman, Wiebe, 1998). This, once again, asserts the importance of prokaryotes as a nutrient reservoir. In the context of microbial resilience, the sheer microbial abundance in the biosphere is an indicator of stability and persistence. With this huge number of rapidly dividing cells, comes an immense net mutation rate. Whitman, Coleman and Wiebe (1998) speculated that four simultaneous mutations in every gene shared by the marine heterotroph, marine autotroph, soil prokaryote and prokaryotes in domesticated animal populations will occur between every 24 minutes to 170 hours. Thus, with such a high simultaneous mutation rate, genetic diversity within microbial conditions allows for rapid speciation and diversification of metabolic, signaling and stress response pathways. One potent example of this is in antibiotic resistance. Currently, pathogenic bacteria are developing resistance to antibiotics faster than we can discover new, effective ones. In a hospital setting, this can occur within days, indicating the impressive adaptability of microbes through rapid division and spontaneous mutation.

Not only are prokaryotes experts in environmental adaptation, they also share their abilities with other microorganisms. Horizontal gene transfer is responsible for the vast diversification of metabolic functions across all taxonomic levels. Despite these functions being incredibly widespread and divergent, with some even forming highly niche specific “boutique genes”, the “core genes” remain conserved (Falkowski et al, 2008). This can be observed throughout various microbial communities in different environments, where the “core” gene set is always represented by several populations within the community. Unsurprisingly, Falkowski et al (2008) dubbed microbes as the “Guardians of Metabolism”. Overall, regardless of the apocalyptic environmental or climate changes that might occur in the future, selective pressures will drive microbes to evolve and distribute new metabolic functions to survive and possibly thrive in a new Earth.

It is clear that microbes will be able to survive just fine without humans, as they have been doing for the most of Earth’s geological history. To summarize Nisbet and Sleep’s 2001 Nature review in a nutshell, with the creation of new substrates and habitats, ecological niches are formed in which bacteria will inhabit to utilize those substrates. This occurred with the earliest ancestral microorganisms that used sulphate around hydrothermal vents, and later on, with the evolution and explosion of oxygen-producing cyanobacteria, aerobic heterotrophs evolved oxidative phosphorylation to catabolize organic carbon sources. We even see this with anthropogenic-produced molecules. Recently, polychlorinated biphenyl (PCB)-degrading Rhodococcus samples have been cultured and characterized (Leigh et al, 2006). PCBs are a recalcitrant, toxic industrial pollutant that cannot be degraded or removed by conventional means. Another example of microbial resourcefulness is the increase in lignin-degrading bacterial populations downstream of paper production factories. The sheer metabolic resilience and versatility of microorganisms cannot be overstated.

Humanity’s Dependence on and Manipulation of Microbial Systems

With the two examples just mentioned in the previous section, we begin to see how us humans may become dependent on microbes for, not only their geochemical cycling, but also their potential as agents for bioremediation. Our industries and transportation systems are responsible for a titanic amount of CO2 and N2O influx into the atmosphere. We also disrupt biogeochemical cycles by increasing plastic, aluminium, black carbon and concrete burial in global sediments (Mooney, 2016). There is no denial that the carbon cycle has already been thrown out of balance. Current atmospheric CO2 levels are at a record 387 ppm, approaching the boundary limit for irreversible loss of the polar ice caps and severe climate change (Rockstrom et al, 2009). We must engineer a system capable of trapping or fixing CO2 and given the innate capacity for marine autotrophs to fix carbon, it is not far-fetched that such a system will utilize microbes for this purpose. We are also drastically increasing the influx of nitrogen to terrestrial and marine ecosystems. With ever-rising demand for food crops we have increased our nitrogen fertilizer usage by ~800% since the 1960s (Canfield et al, 2010), yet around 60% of this fertilizer is leached away and rained into waterways and oceans, causing massed eutrophication. Interestingly, microbial-mediated denitrification, particularly in anoxic marine habitats has risen sharply and has, for the most part, balanced the anthropogenic nitrogen influx (Canfield et al, 2010). However the capacity of this system is uncertain. Plausible solutions include optimizing fertilizer usage and engineering endosymbiosis of N-fixing bacteria into crops to decrease the need for fertilizers. Hence, with our current levels of CO2 production and nitrogen usage, humans cannot possible continue into the future without the buffering effect of microbial catalyzed biogeochemical cycling of essential elements. Even more likely, is that we have to learn to manipulate these functions in order to maintain our way of life and the preservation of the Earth (Mooney, 2016).

Conclusion

In this paper, I have discussed the essential microbial component in biogeochemical cycling of life-sustaining elements including the carbon and nitrogen cycles. I identified that microbial communities, with their high propensity for simultaneous mutations and horizontal gene transfer, as well as sheer abundance, confer a great degree of environmental and metabolic resilience. Lastly, I highlighted the significance of microbial-mediated environmental transformations and metabolic functions in the cushioning of humanity’s detrimental effects on the environment and climate. It is for these reasons that I agree with the statement: “Microbial life can easily live without us; we, however, cannot survive without the global catalysis and environmental transformations it provides.” In the current state of affairs, we are pushing the planetary boundaries as described by Rockstrom et al (2009) and should we fail to limit our destructive behaviors, it is probable that the Earth will experience severe climate and environmental transformations, along with drastic alterations in existing biogeochemical cycles. The prospect of understanding the global microbial metabolic metagenome and engineering specific functions to suit the planet’s needs is an arduous one, possibly involving Petabytes upon Petabytes of metagenomic sequencing data and analysis, not to mention the application and genetic engineering steps. We are headed into the first ever, anthropogenically-engineered eon and it will be our knowledge and manipulation of global microbial functions that lead us to either to human extinction or a lasting, prosperous worldwide symbiosis.

References

Canfield, D. E., Glazer, A. N., & Falkowski, P. G. (2010). The Evolution and Future of Earth’s Nitrogen Cycle. Science,330(6001), 192-196. doi:10.1126/science.1186120

Falkowski, P. G., Fenchel, T., & Delong, E. F. (2008). The Microbial Engines That Drive Earth’s Biogeochemical Cycles. Science,320(5879), 1034-1039. doi:10.1126/science.1153213

Johnson, Z. I., Zinser, E. R., Coe, A., McNulty, N. P., Woodward, E. M. S., Chisholm, S. W. (2006). Niche Partitioning Among Prochlorococcus Ecotypes Along Ocean-Scale Environmental Gradients. Science,311(5768), 1737-1740. doi:10.1126/science.1118052

Kasting, J. F., & Siefert, J. L. (1984). The evolution of the prebiotic atmosphere. Origins of Life,14(1-4), 75-82. doi:10.1007/bf00933642

Leigh, M. B., Prouzova, P., Mackova, M., Macek, T., Nagle, D. P., & Fletcher, J. S. (2006). Polychlorinated Biphenyl (PCB)-Degrading Bacteria Associated with Trees in a PCB-Contaminated Site. Applied and Environmental Microbiology,72(4), 2331-2342. doi:10.1128/aem.72.4.2331-2342.2006

Longhurst, A., Sathyendranath, S., Platt, T., & Caverhill, C. (1995). An estimate of global primary production in the ocean from satellite radiometer data. Journal of Plankton Research,17(6), 1245-1271. doi:10.1093/plankt/17.6.1245

Mooney, C. (2016, January 07). Scientists say humans have now brought on an entirely new geologic epoch. Retrieved February 16, 2018, from https://www.washingtonpost.com/news/energy-environment/wp/2016/01/07/scientists-say-humans-have-now-brought-on-an-entirely-new-geologic-epoch/

Nisbet, E. G., & Sleep, N. H. (2001). The habitat and nature of early life. Nature,409(6823), 1083-1091. doi:10.1038/35059210

Rockström. J., Steffen. W., Noone. K., Persson. Å., Chapin. F. S., Lambin. E. F., Lenton. T. M., Scheffer. M., Folke. C., Schellnhuber H. J.. (2009). A safe operating space for humanity. Nature,461, 472-475

Whitman, W. B., Coleman, D. C., & Wiebe, W. J. (1998). Prokaryotes: The unseen majority. Proceedings of the National Academy of Sciences,95(12), 6578-6583. doi:10.1073/pnas.95.12.6578

Module 1 References

Module 2

Module 2 Portfolio Check

  • Evidence worksheet_04
    • Completion status:
    • Comments:
  • Problem Set_03
    • Completion status:
    • Comments:
  • Additional Readings
    • Completion status:
    • Comments:

Problem set_03 ??Metagenomics: Genomic Analysis of Microbial Communities??

Learning objectives:

Specific emphasis should be placed on the process used to find the answer. Be as comprehensive as possible e.g. provide URLs for web sources, literature citations, etc.
(Reminders for how to format links, etc in RMarkdown are in the RMarkdown Cheat Sheets)

Specific Questions:

  • How many prokaryotic divisions have been described and how many have no cultured representatives (microbial dark matter)?

2016: 89 bact phyla, 20 archael phyla, determined via small 16S rRNA databases, but there could be up to 1500 bact phyla (microbes in the “shadow biosphere”)

  • How many metagenome sequencing projects are currently available in the public domain and what types of environments are they sourced from?

thousands,

  • What types of on-line resources are available for warehousing and/or analyzing environmental sequence information (provide names, URLS and applications)?
Shotgun metagenomics

Databases - MG-RAST, NCBI-refseq, ING-/M

Assembly - EULER

Binning - S-GSOM

Annotation - KEGG

Analysis pipelines - MEGAN 5

Marker gene metagnomics

Standalone Software - OTUbase

Analysis pipelines - SILVA

Denoising - AmpliconNoise

Databases - Ribosomal Database Project (RDP)

  • What is the difference between phylogenetic and functional gene anchors and how can they be used in metagenome analysis?

  • What is metagenomic sequence binning? What types of algorithmic approaches are used to produce sequence bins? What are some risks and opportunities associated with using sequence bins for metabolic reconstruction of uncultivated microorganisms?

the process of grouping sequences that come from a single genome

types of algorithms: align sequences to database, group to each other base don DNA characteristics (GC content, codon usage)

risks: incomplete coverage of genome sequence (partial data), contamination from different phylogeny

  • Is there an alternative to metagenomic shotgun sequencing that can be used to access the metabolic potential of uncultivated microorganisms? What are some risks and opportunities associated with this alternative?

funcitonal screens (biochemical tests), 3rd generation sequencing (nanopore) good hybrid between single cell sequencing and shotgun sequencing, single cell sequencing, FISH probe, possible to combine methods?

Module 2 References

Module 3

Module 3 Portfolio Check

  • Evidence worksheet_05
    • Completion status:
    • Comments:
  • Problem set_04
    • Completion status:
    • Comments:
  • Writing Assessment_03
    • Completion status:
    • Comments:
  • Additional Readings
    • Completion status:
    • Comments:

Problem Set_04

Learning objectives:

Gain experience estimating diversity within a hypothetical microbial community

Part 1: Description and enumeration

Obtain a collection of “microbial” cells from “seawater”. The cells were concentrated from different depth intervals by a marine microbiologist travelling along the Line-P transect in the northeast subarctic Pacific Ocean off the coast of Vancouver Island British Columbia.

Sort out and identify different microbial “species” based on shared properties or traits. Record your data in this Rmarkdown using the example data as a guide.

Once you have defined your binning criteria, separate the cells using the sampling bags provided. These operational taxonomic units (OTUs) will be considered separate “species”. This problem set is based on content available at What is Biodiversity.

For example, load in the packages you will use.

#To make tables
library(kableExtra)
library(knitr)
#To manipulate and plot data
library(tidyverse)

Then load in the data. You should use a similar format to record your community data.

example_data1 = data.frame(
  number = c(1,2,3),
  name = c("lion", "tiger", "bear"),
  characteristics = c("brown cat", "striped cat", "not a cat"),
  occurences = c(2, 4, 1)
)

Finally, use these data to create a table.

example_data1 %>% 
  kable("html") %>%
  kable_styling(bootstrap_options = "striped", font_size = 10, full_width = F)
number name characteristics occurences
1 lion brown cat 2
2 tiger striped cat 4
3 bear not a cat 1

For your sample:

  • Construct a table listing each species, its distinguishing characteristics, the name you have given it, and the number of occurrences of the species in the collection.
  • Ask yourself if your collection of microbial cells from seawater represents the actual diversity of microorganisms inhabiting waters along the Line-P transect. Were the majority of different species sampled or were many missed?
Community_total1 = data.frame(
  number = c(1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20),
  name = c("kiss", "red short string", "red long string", "white spiral", "mike ike", "watermelon", "gummy bear", "marshmallow bear", "lego square", "lego rectangle", "coke", "spider", "big round candy", "skittle", "m&m", "fish", "elongated noodle", "elongated cloud", "elongated oval", "elongated diamond"),
  characteristics = c("teardrop shape", "short string", "long string", "large ellipsoid flat", "rounded rod", "rectangular", "clear bear shape", "opaque bear shape", "large square brick", "small rectangular brick", "coke bottle shape", "spider shape", "sphere", "ellipsoid round", "small elipsoid flat", "fish shape", "short noodle shape", "cloud shape", "oval", "diamond"),
  occurences = c(16,6,10,3,172,1,99,3,3,15,3,6,24,187,243,1,4,3,1,1)
)

Community_total1 %>%
  kable("html") %>%
  kable_styling(bootstrap_options = "striped", font_size = 10, full_width = F)
number name characteristics occurences
1 kiss teardrop shape 16
2 red short string short string 6
3 red long string long string 10
4 white spiral large ellipsoid flat 3
5 mike ike rounded rod 172
6 watermelon rectangular 1
7 gummy bear clear bear shape 99
8 marshmallow bear opaque bear shape 3
9 lego square large square brick 3
10 lego rectangle small rectangular brick 15
11 coke coke bottle shape 3
12 spider spider shape 6
13 big round candy sphere 24
14 skittle ellipsoid round 187
15 m&m small elipsoid flat 243
16 fish fish shape 1
17 elongated noodle short noodle shape 4
18 elongated cloud cloud shape 3
19 elongated oval oval 1
20 elongated diamond diamond 1
#Many species were missed in the sameple and thus does not represent the true diversity of the community. This is due to the fact that many species were low in abundance and not picked up in the sample. 

Part 2: Collector’s Curve

Part 2: Collector’s curve To help answer the questions raised in Part 1, you will conduct a simple but informative analysis that is a standard practice in biodiversity surveys. This analysis involves constructing a collector’s curve that plots the cumulative number of species observed along the y-axis and the cumulative number of individuals classified along the x-axis. This curve is an increasing function with a slope that will decrease as more individuals are classified and as fewer species remain to be identified. If sampling stops while the curve is still rapidly increasing then this indicates that sampling is incomplete and many species remain undetected. Alternatively, if the slope of the curve reaches zero (flattens out), sampling is likely more than adequate.

To construct the curve for your samples, choose a cell within the collection at random. This will be your first data point, such that X = 1 and Y = 1. Next, move consistently in any direction to a new cell and record whether it is different from the first. In this step X = 2, but Y may remain 1 or change to 2 if the individual represents a new species. Repeat this process until you have proceeded through all cells in your collection.

For example, we load in these data.

example_data2 = data.frame(
  x = c(1,2,3,4,5,6,7,8,9,10),
  y = c(1,2,3,4,4,5,5,5,6,6)
)

And then create a plot. We will use a scatterplot (geom_point) to plot the raw data and then add a smoother to see the overall trend of the data.

ggplot(example_data2, aes(x=x, y=y)) +
  geom_point() +
  geom_smooth() +
  labs(x="Cumulative number of individuals classified", y="Cumulative number of species observed")
## `geom_smooth()` using method = 'loess'

For your sample:

  • Create a collector’s curve.
  • Does the curve flatten out? If so, after how many individual cells have been collected?
  • What can you conclude from the shape of your collector’s curve as to your depth of sampling?
Community_sample1 = data.frame(
  x = c(1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20),
  y = c(0,2,6,7,41,41,57,57,57,62,62,64,70,110,164,164,164,164,165,165)
)
ggplot(Community_sample1, aes(x=x, y=y)) +
  geom_point() +
  geom_smooth() +
  labs(x="Cumulative number of individuals classified", y="Cumulative number of species observed")
## `geom_smooth()` using method = 'loess'

#The curve begins to flatten at 8 species and once again at 18 species, the total number of individuals collected is 165.
#Species diversity increases in the sample at the beginning, middle and end of the curve. However, in the intermediary regions, the steepness indicates fewer new species counted.

Part 3: Diversity estimates (alpha diversity)

Using the table from Part 1, calculate species diversity using the following indices or metrics.

Diversity: Simpson Reciprocal Index

\(\frac{1}{D}\) where \(D = \sum p_i^2\)

\(p_i\) = the fractional abundance of the \(i^{th}\) species

For example, using the example data 1 with 3 species with 2, 4, and 1 individuals each, D =

species1 = 2/(2+4+1) species2 = 4/(2+4+1) species3 = 1/(2+4+1)

1 / (species1^2 + species2^2 + species3^2)

Kiss = 5/147 Red_candy = 1/147 Red_long_candy = 1/147 Mike_ike = 34/147 Gummy_bear = 18/147 Lego_square = 1/147 Lego = 2/147 Spider = 1/147 Big_round = 3/147 Skittle = 31/147 MM = 48/147 Fish = 1/147 cloud = 1/147

Simpsons = 1/ (Kiss^2 + Red_candy^2 + Red_long_candy^2 + Mike_ike^2 + Gummy_bear^2 + Lego_square^2 + Lego^2 + Spider^2 + Big_round^2 + Skittle^2 + MM^2 + Fish^2 + cloud^2)

The higher the value is, the greater the diversity. The maximum value is the number of species in the sample, which occurs when all species contain an equal number of individuals. Because the index reflects the number of species present (richness) and the relative proportions of each species with a community (evenness), this metric is a diveristy metric. Consider that a community can have the same number of species (equal richness) but manifest a skewed distribution in the proportion of each species (unequal evenness), which would result in different diveristy values.

  • What is the Simpson Reciprocal Index for your sample?
  • What is the chao1 estimate for your original total community?

Simpson Reciprocal Index (Community)

species1 = 16/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species2 = 6/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species3 = 10/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species4 = 3/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species5 = 172/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species6 = 1/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species7 = 99/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species8 = 3/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species9 = 3/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species10 = 15/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species11 = 3/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species12 = 6/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species13 = 24/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species14 = 187/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species15 = 243/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species16 = 1/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species17 = 4/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species18 = 3/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species19 = 1/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)
species20 = 1/(16+6+10+3+172+1+99+3+3+15+3+6+24+187+243+1+4+3+1+1)

1 / (species1^2 + species2^2 + species3^2 + species4^2 + species5^2 + species6^2 + species7^2 + species8^2 + species9^2 + species10^2 + species11^2 + species12^2 + species13^2 + species14^2 + species15^2 + species16^2 + species17^2 + species18^2 + species19^2 + species20^2)
## [1] 4.763291

Simpson Reciprocal Index (Sample)

species1 = 0/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species2 = 2/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species3 = 4/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species4 = 1/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species5 = 34/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species6 = 0/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species7 = 16/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species8 = 0/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species9 = 0/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species10 = 5/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species11 = 0/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species12 = 2/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species13 = 6/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species14 = 30/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species15 = 54/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species16 = 0/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species17 = 0/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species18 = 0/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species19 = 1/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)
species20 = 0/(0+2+4+1+34+0+16+0+0+5+0+2+6+40+54+0+0+0+1+0)

1 / (species1^2 + species2^2 + species3^2 + species4^2 + species5^2 + species6^2 + species7^2 + species8^2 + species9^2 + species10^2 + species11^2 + species12^2 + species13^2 + species14^2 + species15^2 + species16^2 + species17^2 + species18^2 + species19^2 + species20^2)
## [1] 5.122295

Richness: Chao1 richness estimator

Another way to calculate diversity is to estimate the number of species that are present in a sample based on the empirical data to give an upper boundary of the richness of a sample. Here, we use the Chao1 richness estimator.

\(S_{chao1} = S_{obs} + \frac{a^2}{2b})\)

\(S_{obs}\) = total number of species observed a = species observed once b = species observed twice or more

So for our previous example community of 3 species with 2, 4, and 1 individuals each, \(S_{chao1}\) =

3 + 1^2/(2*2)

Chao1 = (13 + ((6^2)/(27))) What is the chao1 estimate for your sample? * What is the chao1 estimate for your original total community?

Chao1 Richness Estimator (Community)

20 + 4^2/(16*2)
## [1] 20.5

Chao1 Richness Estimator (Sample)

11 + 2^2/(9*2)
## [1] 11.22222

Part 4: Alpha-diversity functions in R

library(vegan)
## Loading required package: permute
## Loading required package: lattice
## This is vegan 2.4-6
Community_total1_diversity = 
  Community_total1 %>% 
  select(name, occurences) %>% 
  spread(name, occurences)

Community_total1_diversity
##   big round candy coke elongated cloud elongated diamond elongated noodle
## 1              24    3               3                 1                4
##   elongated oval fish gummy bear kiss lego rectangle lego square m&m
## 1              1    1         99   16             15           3 243
##   marshmallow bear mike ike red long string red short string skittle
## 1                3      172              10                6     187
##   spider watermelon white spiral
## 1      6          1            3
diversity(Community_total1_diversity, index="invsimpson")
## [1] 4.763291
specpool(Community_total1_diversity)
##     Species chao chao.se jack1 jack1.se jack2 boot boot.se n
## All      20   20       0    20        0    20   20       0 1

Part 5: Concluding activity

If you are stuck on some of these final questions, reading the Kunin et al. 2010 and Lundin et al. 2012 papers may provide helpful insights.

  • How does the measure of diversity depend on the definition of species in your samples?
  • Can you think of alternative ways to cluster or bin your data that might change the observed number of species?
  • How might different sequencing technologies influence observed diversity in a sample?